RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 LMX1BO60663 402 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 GZMHP20718 246 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 S100A4P26447 101 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 TAS2R30P59541 319 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMEM144Q7Z5S9 345 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 FAM89BQ8N5H3 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ATP6V0BQ99437 205 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CENPVL3A0A0U1RRI6 287 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 FAM24AA6NFZ4 105 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ZNF883P0CG24 379 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 SPINT3P49223 89 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMEM256Q8N2U0 113 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 GUCD1Q96NT3 240 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMUB1Q9BVT8 246 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 C5orf66Q9H5L9 145 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 NSG2Q9Y328 171 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 SIRPB1O00241 398 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 OR7C1O76099 320 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 ACTL6BO94805 426 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 DBHP09172 617 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 MMP9P14780 707 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 RPL7P18124 248 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 MRPS36P82909 103 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 SLC48A1Q6P1K1 146 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ZNF788Q6ZQV5 615 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ABHD14BQ96IU4 210 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 IL36RNQ9UBH0 155 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 INSL5Q9Y5Q6 135 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 A0A0A6YYD4 124 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 KIR2DS1A0A191URI9 304 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 WNT10BO00744 389 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 KIR2DS4P43632 304 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 PRLHRP49683 370 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 EFNA4P52798 201 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 KIR2DS1Q14954 304 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ZFAND6Q6FIF0 208 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 RPUSD3Q6P087 351 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 C6orf15Q6UXA7 325 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 ZNF66Q6ZN08 573 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 OR2V1Q8NHB1 315 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 BAHD1Q8TBE0 780 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 A0A1W2PPV4 95 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 GALR2O43603 387 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 CDKN2AP42771 156 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 GNB2P62879 340 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CEACAM21Q3KPI0 293 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 C11orf44Q8N8P7 122 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 PRSS3P2Q8NHM4 247 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 PSMF1Q92530 271 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 NEIL1Q96FI4 390 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 SLC25A22Q9H936 323 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TRIP12Q14669 1992 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 SAA2-SAA4A0A096LPE2 208 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 A0A1W2PPV9 198 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 BCL2P10415 239 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 FUT3P21217 361 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 PSMB5P28074 263 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 BCL6P41182 706 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 NXPH1P58417 271 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 GAB4Q2WGN9 574 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ABHD3Q8WU67 409 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 EMG1Q92979 244 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 CTHRC1Q96CG8 243 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 COQ2Q96H96 371 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 GPR82Q96P67 336 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 MRPS18BQ9Y676 258 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 CEBPZOSA8MTT3 80 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CD55P08174 381 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMEM187Q14656 261 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 INSIG2Q9Y5U4 225 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 PLXNA3P51805 1871 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMEM212A6NML5 194 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 C9orf172C9J069 976 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 C1orf105O95561 183 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 OR1D4P47884 311 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CYB561P49447 251 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TMEM50BP56557 158 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 HERV-K104P63124 156 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 MFGE8Q08431 387 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 C3orf36Q3SXR2 165 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 DCAF12Q5T6F0 453 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 WDR25Q64LD2 544 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 WDR31Q8NA23 367 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 C6orf106Q9H6K1 298 aaPredicted RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 MBNL3Q9NUK0 354 aaKnown RBP2.52□□□□□ -2.01
CHD9-218ENST00000566029 HSPB8Q9UJY1 196 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 BGLAPP02818 100 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CT45A6P0DMU7 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CT45A5P0DMU8 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CT45A7P0DMV0 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CLDN15P56746 228 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 UNC119Q13432 240 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 TIGITQ495A1 244 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CT45A1Q5HYN5 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CCDC144NLQ6NUI1 221 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 Q6ZVH6 145 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 ZNF114Q8NC26 417 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 CT45A3Q8NHU0 189 aa2.52□□□□□ -2.01
CHD9-218ENST00000566029 FBXL15Q9H469 300 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms