RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TPSG1Q9NRR2 321 aa18.38■□□□□ 0.53
RAB40C-209ENST00000565511 OR5H14A6NHG9 310 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 ITGB1BP1O14713 200 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 OR8U8P0C7N1 319 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 CEACAM6P40199 344 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 SLURP1P55000 103 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 RAB11BQ15907 218 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 WWC2-AS2Q96NR7 200 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 ASCL2Q99929 193 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 URM1Q9BTM9 101 aaKnown RBP18.37■□□□□ 0.53
RAB40C-209ENST00000565511 ZMAT5Q9UDW3 170 aaKnown RBP18.37■□□□□ 0.53
RAB40C-209ENST00000565511 WASHC3Q9Y3C0 194 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 NUBP2Q9Y5Y2 271 aa18.37■□□□□ 0.53
RAB40C-209ENST00000565511 LDLRAD4O15165 306 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 RGS10O43665 173 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 CPEP16870 476 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 DCTN2Q13561 401 aaKnown RBP18.36■□□□□ 0.53
RAB40C-209ENST00000565511 ZNF660Q6AZW8 331 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-209ENST00000565511 ZNF383Q8NA42 475 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 CLCC1Q96S66 551 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 HSF4Q9ULV5 492 aa18.36■□□□□ 0.53
RAB40C-209ENST00000565511 FOXA2Q9Y261 457 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-209ENST00000565511 ZNF256Q9Y2P7 627 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-209ENST00000565511 DNAH7Q8WXX0 4024 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 SHISA3A0PJX4 238 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 H7C2Y5 167 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 IGKV1-16P04430 117 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 CALRP27797 417 aaKnown RBP18.35■□□□□ 0.53
RAB40C-209ENST00000565511 MLLT11Q13015 90 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-209ENST00000565511 PSG5Q15238 335 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 DLX4Q92988 240 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-209ENST00000565511 C5orf30Q96GV9 206 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 TOLLIPQ9H0E2 274 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 RIMS4Q9H426 269 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-209ENST00000565511 ISYNA1Q9NPH2 558 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 C12orf4Q9NQ89 552 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 KCNK7Q9Y2U2 307 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 TPRKBQ9Y3C4 175 aa18.35■□□□□ 0.53
RAB40C-209ENST00000565511 IGHV4OR15-8A0A075B7B6 117 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 A0A087WW49 117 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 TMEM272A0A1B0GTI8 110 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 CD3GP09693 182 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 CRHBPP24387 322 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 SSBP2P81877 361 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-209ENST00000565511 PLGLAQ15195 96 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 MOGAT2Q3SYC2 334 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 HES5Q5TA89 166 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 ABHD5Q8WTS1 349 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 PTX4Q96A99 478 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 FAM3DQ96BQ1 224 aa18.34■□□□□ 0.53
RAB40C-209ENST00000565511 METTL1Q9UBP6 276 aaKnown RBP18.34■□□□□ 0.53
RAB40C-209ENST00000565511 HSPA12AO43301 675 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 CA2P00918 260 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 IGHV3-11P01762 117 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 GSTP1P09211 210 aaKnown RBP18.33■□□□□ 0.52
RAB40C-209ENST00000565511 ZBTB25P24278 435 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 SSX1Q16384 188 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 C2orf76Q3KRA6 126 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 PPP1R27Q86WC6 154 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 MGLLQ99685 303 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 CMSS1Q9BQ75 279 aaKnown RBP18.33■□□□□ 0.52
RAB40C-209ENST00000565511 CCDC90BQ9GZT6 254 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 U3KQK5 164 aa18.33■□□□□ 0.52
RAB40C-209ENST00000565511 OVOL1O14753 267 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 ARPC1BO15143 372 aaKnown RBP18.32■□□□□ 0.52
RAB40C-209ENST00000565511 RBBP9O75884 186 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 LGALS1P09382 135 aaKnown RBP18.32■□□□□ 0.52
RAB40C-209ENST00000565511 MC5RP33032 325 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 OR10A3P58181 314 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 CD200R1LQ6Q8B3 271 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 PRSS48Q7RTY5 328 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 EDARADDQ8WWZ3 215 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 MS4A10Q96PG2 267 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAB40C-209ENST00000565511 RDH8Q9NYR8 311 aa18.32■□□□□ 0.52
RAB40C-209ENST00000565511 ARL6IP5O75915 188 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 LY86O95711 162 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 TRAM1Q15629 374 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 UNQ5815/PRO19632Q6UWF5 114 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 LFNGQ8NES3 379 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 V9GY05 133 aa18.31■□□□□ 0.52
RAB40C-209ENST00000565511 A0A0B4J203 849 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 TRDCB7Z8K6 153 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 LINC01619G3V211 115 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 NHLRC4P0CG21 123 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-209ENST00000565511 IGSF11Q5DX21 431 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 MAFIPQ8WZ33 124 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 ARPC1AQ92747 370 aa18.3■□□□□ 0.52
RAB40C-209ENST00000565511 M0R1X1 148 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 DENRO43583 198 aaKnown RBP18.29■□□□□ 0.52
RAB40C-209ENST00000565511 SLC25A17O43808 307 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 IGLV2-23P01705 113 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 SPNP16150 400 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 PSMA1P25786 263 aaKnown RBP18.29■□□□□ 0.52
RAB40C-209ENST00000565511 ACTBL2Q562R1 376 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 HAPLN4Q86UW8 402 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 TCTEX1D1Q8N7M0 179 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 OR56B1Q8NGI3 324 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 MGAT4AQ9UM21 535 aa18.29■□□□□ 0.52
RAB40C-209ENST00000565511 SAP30O75446 220 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms