RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ATP6V1G2-DDX39BF2Z307 99 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 F8W036 122 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 H3BQ85 93 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 ACOX3O15254 700 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 SLC31A1O15431 190 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 IGKV1D-12P01611 117 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 HBZP02008 142 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TFPTP0C1Z6 253 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 LINC00614P0C842 121 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OR13C7P0DN81 318 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 CTSEP14091 401 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 HIST1H1CP16403 213 aaKnown RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 CELP19835 753 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 RPS12P25398 132 aaKnown RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 SLCO1A2P46721 670 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PSMB3P49720 205 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TNFRSF9Q07011 255 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 AESQ08117 197 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 MLLT11Q13015 90 aaPredicted RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 BAMBIQ13145 260 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 APOFQ13790 326 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PDGFRLQ15198 375 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TAF1AQ15573 450 aaPredicted RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 MAPK14Q16539 360 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OGFRL1Q5TC84 451 aaPredicted RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 CST9Q5W186 159 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 IGFL1Q6UW32 110 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 C5orf46Q6UWT4 87 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 VN1R4Q7Z5H5 301 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TMED4Q7Z7H5 227 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 COMMD7Q86VX2 200 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 KRTCAP2Q8N6L1 136 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OR8A1Q8NGG7 326 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OR10J5Q8NHC4 309 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PIGXQ8TBF5 258 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TNFAIP8L1Q8WVP5 186 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PHB2Q99623 299 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 NIPSNAP1Q9BPW8 284 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 BCL2L14Q9BZR8 327 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PCBD2Q9H0N5 130 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OR2D2Q9H210 308 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 BABAM2Q9NXR7 383 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TMEM216Q9P0N5 145 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 MARCOQ9UEW3 520 aaPredicted RBP1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 OR5V1Q9UGF6 321 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 SLC23A2Q9UGH3 650 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 TP53TG1Q9Y2A0 90 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 HDGFL3Q9Y3E1 203 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 MMACHCQ9Y4U1 282 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 ALG5Q9Y673 324 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 ARL5AQ9Y689 179 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 CACNA1SQ13698 1873 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PBRM1Q86U86 1689 aa1.77□□□□□ -2.13
SHCBP1-202ENST00000563219 PPIP5K1Q6PFW1 1433 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 EIF3AQ14152 1382 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 RTL9Q8NET4 1388 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CCNB3Q8WWL7 1395 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CLUHO75153 1309 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 MYO5BQ9ULV0 1848 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 C4orf51C9J302 202 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 TSTD3H0UI37 97 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 TMEM250H0YL14 139 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 PSMD12O00232 456 aaPredicted RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 MRASO14807 208 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CHP2O43745 196 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 SSNA1O43805 119 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 FSTL3O95633 263 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 PDYNP01213 254 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 REG1AP05451 166 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 FAM228BP0C875 321 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 COX4I1P13073 169 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CTLA4P16410 223 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 S100PP25815 95 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 PHBP35232 272 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 INPP1P49441 399 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 SRP9P49458 86 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 AP2S1P53680 142 aaPredicted RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 OR4D2P58180 307 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CCL7P80098 99 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 RPL19P84098 196 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 SRSF6Q13247 344 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 KRR1Q13601 381 aaKnown RBP1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 CLEC12BQ2HXU8 276 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 SPIN3Q5JUX0 258 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 NAA40Q86UY6 237 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 LRP11Q86VZ4 500 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 MSRB3Q8IXL7 192 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 LYPD1Q8N2G4 141 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 STX19Q8N4C7 294 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 PXT1Q8NFP0 134 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 OR52E4Q8NGH9 312 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 OR2V1Q8NHB1 315 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 OR5K1Q8NHB7 308 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 LHFPL5Q8TAF8 219 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 YIPF5Q969M3 257 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 GALMQ96C23 342 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 STACQ99469 402 aa1.76□□□□□ -2.13
SHCBP1-202ENST00000563219 PFDN5Q99471 154 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms