RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 RIMS4Q9H426 269 aaPredicted RBP12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 MGAT4AQ9UM21 535 aa12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
HERPUD1-205ENST00000562914 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 BAG2O95816 211 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 LALBAP00709 142 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 CD1AP06126 327 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 PSG5Q15238 335 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 RPL39P5Q59GN2 51 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF555Q8NEP9 628 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 OR2K2Q8NGT1 345 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 AGMATQ9BSE5 352 aa12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 THAP7Q9BT49 309 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-205ENST00000562914 SHISA3A0PJX4 238 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 NAPSAO96009 420 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 CPEP16870 476 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 ZBTB25P24278 435 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 FXYD3Q14802 87 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 SMN1Q16637 294 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 LAX1Q8IWV1 398 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 FAM46BQ96A09 425 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 TMEM80Q96HE8 168 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 CLCC1Q96S66 551 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 SULT4A1Q9BR01 284 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 TMED9Q9BVK6 235 aa12.01□□□□□ -0.49
HERPUD1-205ENST00000562914 A0A1W2PPK0 400 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 APOA2P02652 100 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 RPS16P62249 146 aaKnown RBP12□□□□□ -0.49
HERPUD1-205ENST00000562914 RPS27AP62979 156 aaKnown RBP12□□□□□ -0.49
HERPUD1-205ENST00000562914 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 C5orf24Q7Z6I8 188 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF485Q8NCK3 441 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 ABHD14BQ96IU4 210 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 USMG5Q96IX5 58 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 FAAP24Q9BTP7 215 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
HERPUD1-205ENST00000562914 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
HERPUD1-205ENST00000562914 PEF1Q9UBV8 284 aaKnown RBP12□□□□□ -0.49
HERPUD1-205ENST00000562914 TRBV6-6A0A0A6YYG2 114 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 AIREO43918 545 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 OR2A4O95047 310 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 CNIH1O95406 144 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 TTC23Q5W5X9 447 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF343Q6P1L6 599 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 C6orf201Q7Z4U5 140 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 GRPEL2Q8TAA5 225 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 KCNG3Q8TAE7 436 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 PTX4Q96A99 478 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 TM2D1Q9BX74 207 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 PEMTQ9UBM1 199 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 CLEC2DQ9UHP7 191 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF221Q9UK13 617 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 CEPT1Q9Y6K0 416 aa11.99□□□□□ -0.49
HERPUD1-205ENST00000562914 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 CEACAM6P40199 344 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 LGALS7P47929 136 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 RPEL1Q2QD12 228 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 LINC00322Q6ZN03 302 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 ZFP41Q8N8Y5 198 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 TINAGL1Q9GZM7 467 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 C11orf54Q9H0W9 315 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 HIPK2Q9H2X6 1198 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 PLEKHJ1Q9NW61 149 aa11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 SMPD3Q9NY59 655 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-205ENST00000562914 EFCAB10A6NFE3 127 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 TPPPO94811 219 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 BPNT1O95861 308 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 CSN3P07498 182 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 GLT8D1Q68CQ7 371 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 SETD6Q8TBK2 473 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 SNAPC3Q92966 411 aa11.97□□□□□ -0.49
HERPUD1-205ENST00000562914 A0A0B4J203 849 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 SLC25A17O43808 307 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 CELP19835 753 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 HTR2CP28335 458 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 MECP2P51608 486 aaKnown RBP11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 HLA-DRB3P79483 266 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 TAGLNQ01995 201 aaKnown RBP11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 C1orf100Q5SVJ3 147 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 SETD9Q8NE22 299 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 PHYHIPQ92561 330 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 SLC2A8Q9NY64 477 aa11.96□□□□□ -0.49
HERPUD1-205ENST00000562914 PROP1O75360 226 aa11.95□□□□□ -0.5
HERPUD1-205ENST00000562914 CD81P60033 236 aa11.95□□□□□ -0.5
HERPUD1-205ENST00000562914 ST3GAL4Q11206 333 aa11.95□□□□□ -0.5
HERPUD1-205ENST00000562914 CBX3Q13185 183 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms