RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ZNF705FA8MVS1 300 aaPredicted RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 OR11H12B2RN74 326 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 NPYP01303 97 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 LIMS3P0CW19 117 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 LIMS4P0CW20 117 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 CCL3P10147 92 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 CFL1P23528 166 aaKnown RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 CCR7P32248 378 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 AKR1C3P42330 323 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 OR10A3P58181 314 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 C1DQ13901 141 aaKnown RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 SYCP1Q15431 976 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 RBM48Q5RL73 367 aaKnown RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 OR10K2Q6IF99 312 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 UNQ6190/PRO20217Q6UXQ8 127 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 CNEP1R1Q8N9A8 125 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 OR11H2Q8NH07 326 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 ACY3Q96HD9 319 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 SERPINB11Q96P15 392 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 MED9Q9NWA0 146 aa0.69□□□□□ -2.3
CHD9-207ENST00000562806 NYNRINQ9P2P1 1898 aaKnown RBP0.69□□□□□ -2.3
CHD9-207ENST00000562806 GRIN2BQ13224 1484 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 A0A1W2PQD3 144 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 SULT1C2O00338 296 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 BHLHE40O14503 412 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 GSTZ1O43708 216 aaPredicted RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 HBZP02008 142 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 C1QCP02747 245 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 CRYBA1P05813 215 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 S100A9P06702 114 aaKnown RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 OR13C7P0DN81 318 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 HSPA9P38646 679 aaKnown RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 CA7P43166 264 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 EVX1P49640 407 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 DLX6P56179 175 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 TAS2R30P59541 319 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 DYNLL1P63167 89 aaKnown RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 XIAPP98170 497 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 GNA12Q03113 381 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 STX3Q13277 289 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 USF2Q15853 346 aaPredicted RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 PLCZ1Q86YW0 608 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 OR52E4Q8NGH9 312 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 CLDND2Q8NHS1 167 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 SLC7A6Q92536 515 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 MS4A6EQ96DS6 147 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 CPNE2Q96FN4 548 aaPredicted RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 DOHHQ9BU89 302 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 PRRG3Q9BZD7 231 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 TMEM222Q9H0R3 208 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 MRM2Q9UI43 246 aaKnown RBP0.68□□□□□ -2.3
CHD9-207ENST00000562806 SLX4Q8IY92 1834 aa0.68□□□□□ -2.3
CHD9-207ENST00000562806 FN1P02751 2386 aaKnown RBP0.67□□□□□ -2.3
CHD9-207ENST00000562806 NPATQ14207 1427 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 IGKV3-7A0A075B6H7 116 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 A8MUN3 132 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 MRPS14O60783 128 aaKnown RBP0.67□□□□□ -2.3
CHD9-207ENST00000562806 SNAP25P60880 206 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 LRRC28Q86X40 367 aaPredicted RBP0.67□□□□□ -2.3
CHD9-207ENST00000562806 DYNC2LI1Q8TCX1 351 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 SMCR5Q8TEV8 140 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 ASB17Q8WXJ9 295 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 TLCD1Q96CP7 247 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 CYTH2Q99418 400 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 GNB1LQ9BYB4 327 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 OR51B6Q9H340 312 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 DSCAML1Q8TD84 2053 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 MED13Q9UHV7 2174 aa0.67□□□□□ -2.3
CHD9-207ENST00000562806 SDK1Q7Z5N4 2213 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 MALRD1Q5VYJ5 2156 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 CCDC88CQ9P219 2028 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 TRAV8-1A0A0A6YYK1 113 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 TRBV6-5A0A0K0K1A5 114 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 RFPL4AA6NLU0 287 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 RFPL4AL1F8VTS6 287 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 ARL6IP5O75915 188 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 TNFAIP8O95379 198 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 SERPINA7P05543 415 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 CRYBB3P26998 211 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 OR10J1P30954 320 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 RPL27AP46776 148 aaKnown RBP0.66□□□□□ -2.3
CHD9-207ENST00000562806 SERPINB10P48595 397 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 RBM11P57052 281 aaKnown RBP0.66□□□□□ -2.3
CHD9-207ENST00000562806 HOXC5Q00444 222 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 SLC38A11Q08AI6 406 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 NNATQ16517 81 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 ZNF791Q3KP31 576 aaPredicted RBP0.66□□□□□ -2.3
CHD9-207ENST00000562806 LYZL1Q6UWQ5 148 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 OR5AK3PQ8NH89 298 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 TMEM56Q96MV1 263 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 CST9LQ9H4G1 147 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 SLC2A9Q9NRM0 540 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 STK38LQ9Y2H1 464 aa0.66□□□□□ -2.3
CHD9-207ENST00000562806 KLK5Q9Y337 293 aaPredicted RBP0.66□□□□□ -2.3
CHD9-207ENST00000562806 LOC100506127A0A0U1RQW1 187 aa0.65□□□□□ -2.31
CHD9-207ENST00000562806 A0A1B0GW54 56 aa0.65□□□□□ -2.31
CHD9-207ENST00000562806 TXNDC9O14530 226 aa0.65□□□□□ -2.31
CHD9-207ENST00000562806 KLRC4O43908 158 aa0.65□□□□□ -2.31
CHD9-207ENST00000562806 NEMFO60524 1076 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms