RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SSTR5P35346 364 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 CEACAM6P40199 344 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 GABRA2P47869 451 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 LOXL3P58215 753 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 FGL1Q08830 312 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 MSMO1Q15800 293 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 C17orf58Q2M2W7 97 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 ABCA11PQ4W5N1 156 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 UTF1Q5T230 341 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 C6orf183Q5T699 404 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 CST9LP1Q5W188 147 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 C11orf87Q6NUJ2 197 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 GSG1LQ6UXU4 331 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 TMUB2Q71RG4 321 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 WFDC3Q8IUB2 231 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 SELENOHQ8IZQ5 122 aaKnown RBP5.4□□□□□ -1.54
CAPN3-210ENST00000561817 FGFRL1Q8N441 504 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 FAM216BQ8N7L0 139 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 C14orf79Q96F83 325 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 AKR1E2Q96JD6 320 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 FANCD2OSQ96PS1 177 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 CCL13Q99616 98 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 AGMATQ9BSE5 352 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 EGLN1Q9GZT9 426 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 DNTTIP1Q9H147 329 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 C11orf1Q9H5F2 150 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 TMEM106BQ9NUM4 274 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 KCNIP1Q9NZI2 227 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 KCNIP3Q9Y2W7 256 aa5.4□□□□□ -1.54
CAPN3-210ENST00000561817 USF3Q68DE3 2245 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 C13orf42A0A1B0GVH6 325 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 CLEC18AA5D8T8 446 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 C5orf51A6NDU8 294 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 FAM90A9PA6NNJ1 464 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 C19orf84I3L1E1 186 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ITGB1BP1O14713 200 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PHF1O43189 567 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PROP1O75360 226 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 RP2O75695 350 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 FSTL3O95633 263 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 CFDP00746 253 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 IGKV1-39P01597 117 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 GYPAP02724 150 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 IGKV1D-39P04432 117 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 DANCRP0C864 163 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 GZMHP20718 246 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 F2RP25116 425 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PPP1CCP36873 323 aaKnown RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PPOXP50336 477 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PRRX1P54821 245 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 BRWD1-AS2P59051 145 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 CYCSP99999 105 aaKnown RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 EDDM3AQ14507 147 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF345Q14585 488 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 OPCMLQ14982 345 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF585BQ52M93 769 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 NMSQ5H8A3 153 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 PRSS54Q6PEW0 395 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 DTX2Q86UW9 622 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 LGI3Q8N145 548 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 MUC15Q8N387 334 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 KCNRGQ8N5I3 272 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 DRAM1Q8N682 238 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF565Q8N9K5 539 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 CLEC18CQ8NCF0 446 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 DEFB108BQ8NET1 73 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 OR5D13Q8NGL4 314 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 OR4D5Q8NGN0 318 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 IL1F10Q8WWZ1 152 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 IL22RA2Q969J5 263 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ARL11Q969Q4 196 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 GALMQ96C23 342 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 RRNAD1Q96FB5 475 aaKnown RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 VRK1Q99986 396 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF665Q9H7R5 613 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 SAP30LQ9HAJ7 183 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 OR5AC2Q9NZP5 309 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 MBD2Q9UBB5 411 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 KAAG1Q9UBP8 84 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 DCHS2Q6V1P9 2916 aa5.39□□□□□ -1.55
CAPN3-210ENST00000561817 FLNCQ14315 2725 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 ARID1AO14497 2285 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 PPIAL4EA0A075B759 164 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 TRAV38-1A0A0B4J264 116 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 IGHV1-69-2A0A0G2JMI3 117 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 A0A0G2JRQ6 117 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 KBTBD11-OT1A0A1B0GTJ5 212 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 DUXBA0A1W2PPF3 345 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 MEX3AA1L020 520 aaKnown RBP5.38□□□□□ -1.55
CAPN3-210ENST00000561817 MSGN1A6NI15 193 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 LRRC30A6NM36 301 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 PPIAL4DF5H284 164 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 ARPC5O15511 151 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 YPEL1O60688 119 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 PITX3O75364 302 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 OR2F2O95006 317 aa5.38□□□□□ -1.55
CAPN3-210ENST00000561817 CLDN1O95832 211 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms