RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SYNGR3O43761 229 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR2A4O95047 310 aa2.58□□□□□ -2
SPG11-225ENST00000561391 IFNA7P01567 189 aa2.58□□□□□ -2
SPG11-225ENST00000561391 IGLV3-1P01715 115 aa2.58□□□□□ -2
SPG11-225ENST00000561391 MT-ND4P03905 459 aa2.58□□□□□ -2
SPG11-225ENST00000561391 CD74P04233 296 aa2.58□□□□□ -2
SPG11-225ENST00000561391 RLN1P04808 185 aa2.58□□□□□ -2
SPG11-225ENST00000561391 FCER2P06734 321 aa2.58□□□□□ -2
SPG11-225ENST00000561391 LIPFP07098 398 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GIPP09681 153 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 RBMY1A1P0DJD3 496 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 HLA-GP17693 338 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NFYAP23511 347 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 BTCP35070 178 aa2.58□□□□□ -2
SPG11-225ENST00000561391 PTGFRP43088 359 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR3A3P47888 321 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR3A2P47893 321 aa2.58□□□□□ -2
SPG11-225ENST00000561391 SRP9P49458 86 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 CCR6P51684 374 aa2.58□□□□□ -2
SPG11-225ENST00000561391 PRKXP51817 358 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ATP1B3P54709 279 aa2.58□□□□□ -2
SPG11-225ENST00000561391 CLDN12P56749 244 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GNG2P59768 71 aa2.58□□□□□ -2
SPG11-225ENST00000561391 QRFPP83859 136 aa2.58□□□□□ -2
SPG11-225ENST00000561391 RPL36AP83881 106 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 MFGE8Q08431 387 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 ZNF154Q13106 437 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ENDOGQ14249 297 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 SURF2Q15527 256 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 KISS1Q15726 138 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ZNF718Q3SXZ3 478 aa2.58□□□□□ -2
SPG11-225ENST00000561391 SLC35E4Q6ICL7 350 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GLIPR1L1Q6UWM5 242 aa2.58□□□□□ -2
SPG11-225ENST00000561391 BRD3OSQ6XYD6 125 aa2.58□□□□□ -2
SPG11-225ENST00000561391 IDO2Q6ZQW0 420 aa2.58□□□□□ -2
SPG11-225ENST00000561391 Q6ZT83 130 aa2.58□□□□□ -2
SPG11-225ENST00000561391 Q6ZTC4 211 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NAA40Q86UY6 237 aa2.58□□□□□ -2
SPG11-225ENST00000561391 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
SPG11-225ENST00000561391 C12orf45Q8N5I9 185 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 RPP25LQ8N5L8 163 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 UXS1Q8NBZ7 420 aa2.58□□□□□ -2
SPG11-225ENST00000561391 WFDC9Q8NEX5 89 aa2.58□□□□□ -2
SPG11-225ENST00000561391 DMBX1Q8NFW5 382 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR4F17Q8NGA8 305 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR8B12Q8NGG6 310 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR51A2Q8NGJ7 313 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR10AC1Q8NH08 325 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TERB2Q8NHR7 220 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ZNF431Q8TF32 576 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 ABHD3Q8WU67 409 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TNFAIP8L1Q8WVP5 186 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GIMAP1Q8WWP7 306 aa2.58□□□□□ -2
SPG11-225ENST00000561391 DYRK2Q92630 601 aa2.58□□□□□ -2
SPG11-225ENST00000561391 RDH5Q92781 318 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NABP1Q96AH0 204 aa2.58□□□□□ -2
SPG11-225ENST00000561391 APOBEC3DQ96AK3 386 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 APH1AQ96BI3 265 aa2.58□□□□□ -2
SPG11-225ENST00000561391 SGK3Q96BR1 496 aa2.58□□□□□ -2
SPG11-225ENST00000561391 RAB39BQ96DA2 213 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ZNF799Q96GE5 643 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR2A7Q96R45 310 aa2.58□□□□□ -2
SPG11-225ENST00000561391 OR4F4Q96R69 305 aa2.58□□□□□ -2
SPG11-225ENST00000561391 PHB2Q99623 299 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GAL3ST1Q99999 423 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TMEM246Q9BRR3 403 aa2.58□□□□□ -2
SPG11-225ENST00000561391 GINS4Q9BRT9 223 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TM2D1Q9BX74 207 aa2.58□□□□□ -2
SPG11-225ENST00000561391 TMEM59Q9BXS4 323 aa2.58□□□□□ -2
SPG11-225ENST00000561391 METTL9Q9H1A3 318 aa2.58□□□□□ -2
SPG11-225ENST00000561391 RIMS4Q9H426 269 aaPredicted RBP2.58□□□□□ -2
SPG11-225ENST00000561391 C16orf95Q9H693 158 aa2.58□□□□□ -2
SPG11-225ENST00000561391 CRLF2Q9HC73 371 aa2.58□□□□□ -2
SPG11-225ENST00000561391 IFT46Q9NQC8 304 aa2.58□□□□□ -2
SPG11-225ENST00000561391 ZFP57Q9NU63 452 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NKIRAS2Q9NYR9 191 aa2.58□□□□□ -2
SPG11-225ENST00000561391 IL36GQ9NZH8 169 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NOSIPQ9Y314 301 aaKnown RBP2.58□□□□□ -2
SPG11-225ENST00000561391 SIGLEC9Q9Y336 463 aa2.58□□□□□ -2
SPG11-225ENST00000561391 HSPB11Q9Y547 144 aa2.58□□□□□ -2
SPG11-225ENST00000561391 NPTNQ9Y639 398 aa2.58□□□□□ -2
SPG11-225ENST00000561391 PCNX3Q9H6A9 2034 aa2.58□□□□□ -2
SPG11-225ENST00000561391 LOC100509620A0A075B734 347 aa2.57□□□□□ -2
SPG11-225ENST00000561391 IGKV1D-43A0A0B4J1Z2 117 aa2.57□□□□□ -2
SPG11-225ENST00000561391 A0A0B4J203 849 aa2.57□□□□□ -2
SPG11-225ENST00000561391 A0A0B4J293 547 aa2.57□□□□□ -2
SPG11-225ENST00000561391 A0A0B4J2A0 478 aa2.57□□□□□ -2
SPG11-225ENST00000561391 A0A0D9SG52 128 aa2.57□□□□□ -2
SPG11-225ENST00000561391 IFITM10A6NMD0 228 aa2.57□□□□□ -2
SPG11-225ENST00000561391 C15orf62A8K5M9 175 aa2.57□□□□□ -2
SPG11-225ENST00000561391 CEACAM18A8MTB9 384 aa2.57□□□□□ -2
SPG11-225ENST00000561391 TRAPPC2LH3BP13 241 aa2.57□□□□□ -2
SPG11-225ENST00000561391 ARPC1BO15143 372 aaKnown RBP2.57□□□□□ -2
SPG11-225ENST00000561391 GMDSO60547 372 aa2.57□□□□□ -2
SPG11-225ENST00000561391 ATP6V1G1O75348 118 aa2.57□□□□□ -2
SPG11-225ENST00000561391 CRTAPO75718 401 aaPredicted RBP2.57□□□□□ -2
SPG11-225ENST00000561391 DUS4LO95620 317 aaKnown RBP2.57□□□□□ -2
SPG11-225ENST00000561391 CST4P01036 141 aa2.57□□□□□ -2
SPG11-225ENST00000561391 IGHV3-9P01782 118 aa2.57□□□□□ -2
SPG11-225ENST00000561391 IGHV2-5P01817 119 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms