RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 A6NJ64 397 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 SCGNO76038 276 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 TAS2R20P59543 309 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 ACTBP60709 375 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 ARL6IP1Q15041 203 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 ARSJQ5FYB0 599 aaPredicted RBP10.98□□□□□ -0.65
TPM1-230ENST00000561266 FAM71F2Q6NXP2 309 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 HOGA1Q86XE5 327 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 EDARADDQ8WWZ3 215 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
TPM1-230ENST00000561266 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
TPM1-230ENST00000561266 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
TPM1-230ENST00000561266 OR2D2Q9H210 308 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 DIABLOQ9NR28 239 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
TPM1-230ENST00000561266 DIRAS3O95661 229 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 IGLV2-14P01704 120 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 IGHG2P01859 326 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 GPR12P47775 334 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 RORCP51449 518 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 PITPNAQ00169 270 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 OR5AU1Q8NGC0 362 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 GINS4Q9BRT9 223 aa10.97□□□□□ -0.65
TPM1-230ENST00000561266 ZNF107Q9UII5 783 aaPredicted RBP10.97□□□□□ -0.65
TPM1-230ENST00000561266 M0QZK8 103 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 M0R1X1 148 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 IGKV1-16P04430 117 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 RPL5P46777 297 aaKnown RBP10.96□□□□□ -0.65
TPM1-230ENST00000561266 TMEM69Q5SWH9 247 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 CNIH2Q6PI25 160 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 ZNF329Q86UD4 541 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 BEST4Q8NFU0 473 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 PHF21AQ96BD5 680 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
TPM1-230ENST00000561266 ZNF221Q9UK13 617 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 GAB2Q9UQC2 676 aa10.96□□□□□ -0.65
TPM1-230ENST00000561266 TNCP24821 2201 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 LINC00473A8K010 186 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 FCN1O00602 326 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 FBXO24O75426 580 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 TUSC2O75896 110 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 APOA1P02647 267 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 ZNF182P17025 639 aaPredicted RBP10.95□□□□□ -0.66
TPM1-230ENST00000561266 CD83Q01151 205 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 MMDQ15546 238 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 CENPVQ7Z7K6 275 aaPredicted RBP10.95□□□□□ -0.66
TPM1-230ENST00000561266 NPBQ8NG41 125 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 DYNC2LI1Q8TCX1 351 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 GPHA2Q96T91 129 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 CEPT1Q9Y6K0 416 aa10.95□□□□□ -0.66
TPM1-230ENST00000561266 CTDSP2O14595 271 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 NBR2O15453 112 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 PEX14O75381 377 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 NDUFA3O95167 84 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 AADACP22760 399 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 RPL30P62888 115 aaKnown RBP10.94□□□□□ -0.66
TPM1-230ENST00000561266 EIF4EBP1Q13541 118 aaPredicted RBP10.94□□□□□ -0.66
TPM1-230ENST00000561266 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 C18orf65Q6ZTR6 163 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 SLC35E3Q7Z769 313 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 LYSMD2Q8IV50 215 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.94□□□□□ -0.66
TPM1-230ENST00000561266 ACOT12Q8WYK0 555 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 DDB2Q92466 427 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 RASL11BQ9BPW5 248 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 GHITMQ9H3K2 345 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 TPSG1Q9NRR2 321 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 MRPS7Q9Y2R9 242 aaKnown RBP10.94□□□□□ -0.66
TPM1-230ENST00000561266 WASHC3Q9Y3C0 194 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 OR2W1Q9Y3N9 320 aa10.94□□□□□ -0.66
TPM1-230ENST00000561266 IGHV7-81A0A0B4J1V7 117 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 A0A1W2PRX2 142 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 SRRM4A7MD48 611 aaKnown RBP10.93□□□□□ -0.66
TPM1-230ENST00000561266 H3BMQ9 156 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 H7C2Y5 167 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 IGLV2-23P01705 113 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 NAT1P18440 290 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
TPM1-230ENST00000561266 TMBIM6P55061 237 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 NDPQ00604 133 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 C5orf64Q2M2E5 130 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 STPG2Q8N412 459 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 BVESQ8NE79 360 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 OR8H1Q8NGG4 311 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 FAM110DQ8TAY7 271 aaPredicted RBP10.93□□□□□ -0.66
TPM1-230ENST00000561266 GPX8Q8TED1 209 aa10.93□□□□□ -0.66
TPM1-230ENST00000561266 ISOC1Q96CN7 298 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms