RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC6A1P30531 599 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 THBS3P49746 956 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 GNG2P59768 71 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 CFHR3Q02985 330 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 CBX3Q13185 183 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 MMDQ15546 238 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 Q6ZS49 121 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 S100A16Q96FQ6 103 aaKnown RBP12.54□□□□□ -0.4
LMX1B-204ENST00000561065 NABP2Q9BQ15 211 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 C11orf54Q9H0W9 315 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-204ENST00000561065 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 RHBDL2Q9NX52 303 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 RDH8Q9NYR8 311 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 KCNK7Q9Y2U2 307 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 SMIM30A4D0T7 59 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 BET1O15155 118 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 SLC22A5O76082 557 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 KRTAP10-11P60412 298 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 ACTBP60709 375 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 MOGAT2Q3SYC2 334 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 TEX38Q6PEX7 206 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 NR2C2APQ86WQ0 139 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 KLHL30-AS1Q8NEE0 82 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 RCC1LQ96I51 464 aaKnown RBP12.53□□□□□ -0.4
LMX1B-204ENST00000561065 DUX3Q96PT4 197 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 PARP12Q9H0J9 701 aaKnown RBP12.53□□□□□ -0.4
LMX1B-204ENST00000561065 IFI27L2Q9H2X8 130 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
LMX1B-204ENST00000561065 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 A0A0B4J203 849 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 K7EIL1 84 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 APOA2P02652 100 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 RPLP1P05386 114 aaKnown RBP12.52□□□□□ -0.41
LMX1B-204ENST00000561065 SNRPBP14678 240 aaKnown RBP12.52□□□□□ -0.41
LMX1B-204ENST00000561065 CNTFRP26992 372 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 OR3A3P47888 321 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 LIN54Q6MZP7 749 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 LGALS14Q8TCE9 139 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 ABHD14BQ96IU4 210 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 RITA1Q96K30 269 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 P2RX4Q99571 388 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 AGMATQ9BSE5 352 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 SPATA2Q9UM82 520 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 WASHC3Q9Y3C0 194 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 COL7A1Q02388 2944 aa12.52□□□□□ -0.41
LMX1B-204ENST00000561065 NBR2O15453 112 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 TFAP2AP05549 437 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 GSTT2P0CG29 244 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 GSTT2BP0CG30 244 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 VDAC1P21796 283 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
LMX1B-204ENST00000561065 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 PLGLAQ15195 96 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
LMX1B-204ENST00000561065 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
LMX1B-204ENST00000561065 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 OR1A1Q9P1Q5 309 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 RNF150Q9ULK6 438 aa12.51□□□□□ -0.41
LMX1B-204ENST00000561065 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 OR8U9P0C7N5 309 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 CT45A6P0DMU7 189 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 CT45A5P0DMU8 189 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 CT45A7P0DMV0 189 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 RRASP10301 218 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 CBX5P45973 191 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 EGFEM1PQ0D2K5 195 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 TMEM267Q0VDI3 215 aaPredicted RBP12.5□□□□□ -0.41
LMX1B-204ENST00000561065 DEFB136Q30KP8 78 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 NPBQ8NG41 125 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 OR5AN1Q8NGI8 311 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 RAX2Q96IS3 184 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
LMX1B-204ENST00000561065 TRAV18A0A075B6X5 111 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 SMIM31A0A1B0GVY4 71 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 WI2-2373I1.2A0A1W2PRP0 233 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 TRIM64CA6NLI5 447 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 HLA-DRB1P01911 266 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-204ENST00000561065 CNIH2Q6PI25 160 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 TMEM65Q6PI78 240 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF695Q8IW36 515 aa12.49□□□□□ -0.41
LMX1B-204ENST00000561065 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
LMX1B-204ENST00000561065 ZNF230Q9UIE0 474 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-204ENST00000561065 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
LMX1B-204ENST00000561065 IGF1P05019 195 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 ELANEP08246 267 aa12.48□□□□□ -0.41
LMX1B-204ENST00000561065 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms