RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ST8SIA5O15466 376 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 FSTP19883 344 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 ALDH3A2P51648 485 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 AWAT2Q6E213 333 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 OR5T1Q8NG75 326 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 DDB2Q92466 427 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 SMIM19Q96E16 107 aa14.02□□□□□ -0.17
TPM1-226ENST00000560959 PCLOQ9Y6V0 5065 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 ZNF785A8K8V0 405 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 RPEL1Q2QD12 228 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 Q499Y3 187 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 TMPRSS11AQ6ZMR5 421 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 JAGN1Q8N5M9 183 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 GRPEL2Q8TAA5 225 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 SNAPC3Q92966 411 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 TINAGL1Q9GZM7 467 aaPredicted RBP14.01□□□□□ -0.17
TPM1-226ENST00000560959 FGF20Q9NP95 211 aaPredicted RBP14.01□□□□□ -0.17
TPM1-226ENST00000560959 BABAM2Q9NXR7 383 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 GHRLQ9UBU3 117 aa14.01□□□□□ -0.17
TPM1-226ENST00000560959 TRAV8-7A0A075B6U6 113 aa14□□□□□ -0.17
TPM1-226ENST00000560959 CRTAPO75718 401 aaPredicted RBP14□□□□□ -0.17
TPM1-226ENST00000560959 BAG2O95816 211 aa14□□□□□ -0.17
TPM1-226ENST00000560959 CPEP16870 476 aa14□□□□□ -0.17
TPM1-226ENST00000560959 RPS16P62249 146 aaKnown RBP14□□□□□ -0.17
TPM1-226ENST00000560959 ZIK1Q3SY52 487 aaPredicted RBP14□□□□□ -0.17
TPM1-226ENST00000560959 YIF1BQ5BJH7 314 aa14□□□□□ -0.17
TPM1-226ENST00000560959 IL1F10Q8WWZ1 152 aa14□□□□□ -0.17
TPM1-226ENST00000560959 SULT4A1Q9BR01 284 aa14□□□□□ -0.17
TPM1-226ENST00000560959 ST6GALNAC5Q9BVH7 336 aa14□□□□□ -0.17
TPM1-226ENST00000560959 EI24O14681 340 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 IGKV1-16P04430 117 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 LGALS7P47929 136 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 CD300EQ496F6 205 aaPredicted RBP13.99□□□□□ -0.17
TPM1-226ENST00000560959 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 PDPNQ86YL7 162 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 BVESQ8NE79 360 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 EDARADDQ8WWZ3 215 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 ADAM30Q9UKF2 790 aa13.99□□□□□ -0.17
TPM1-226ENST00000560959 TRBV5-7A0A0A0MS05 114 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 A0A0B4J203 849 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 NUPR2A6NF83 97 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 OR11H12B2RN74 326 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 PROP1O75360 226 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 TRBV12-3P01733 135 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 CD7P09564 240 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 SNRPBP14678 240 aaKnown RBP13.98□□□□□ -0.17
TPM1-226ENST00000560959 DCKP27707 260 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 RPS11P62280 158 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-226ENST00000560959 SSBP2P81877 361 aaPredicted RBP13.98□□□□□ -0.17
TPM1-226ENST00000560959 DYRK1AQ13627 763 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 ZNF880Q6PDB4 577 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 OR13C5Q8NGS8 318 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 ABHD14BQ96IU4 210 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 NEDD4LQ96PU5 975 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 UQCC2Q9BRT2 126 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
TPM1-226ENST00000560959 NAPSAO96009 420 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 ETV1P50549 477 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 SVOPQ8N4V2 548 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 FAM46BQ96A09 425 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 PTX4Q96A99 478 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 CYYR1Q96J86 154 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 ZC4H2Q9NQZ6 224 aa13.97□□□□□ -0.17
TPM1-226ENST00000560959 ZBTB25P24278 435 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 DEFB114Q30KQ6 69 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 OR2G6Q5TZ20 316 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 NKAIN3Q8N8D7 197 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 ZNF383Q8NA42 475 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 FAAP24Q9BTP7 215 aa13.96□□□□□ -0.17
TPM1-226ENST00000560959 C11orf54Q9H0W9 315 aaPredicted RBP13.96□□□□□ -0.17
TPM1-226ENST00000560959 RIMS4Q9H426 269 aaPredicted RBP13.96□□□□□ -0.17
TPM1-226ENST00000560959 H3BNX3 289 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 APOA2P02652 100 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 CRYGBP07316 175 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 KIR2DS2P43631 304 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 RASSF2P50749 326 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 DRAXINQ8NBI3 349 aaPredicted RBP13.95□□□□□ -0.18
TPM1-226ENST00000560959 PGLYRP3Q96LB9 341 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 SLC29A1Q99808 456 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 OVOL2Q9BRP0 275 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 PARP12Q9H0J9 701 aaKnown RBP13.95□□□□□ -0.18
TPM1-226ENST00000560959 TECRQ9NZ01 308 aaKnown RBP13.95□□□□□ -0.18
TPM1-226ENST00000560959 DNAH10Q8IVF4 4471 aa13.95□□□□□ -0.18
TPM1-226ENST00000560959 TRBV6-6A0A0A6YYG2 114 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 LALBAP00709 142 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 IGLV2-23P01705 113 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 UBBP0CG47 229 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 CEACAM6P40199 344 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 PJVKQ0ZLH3 352 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
TPM1-226ENST00000560959 APH1BQ8WW43 257 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 KCTD12Q96CX2 325 aaKnown RBP13.94□□□□□ -0.18
TPM1-226ENST00000560959 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 MGAT4AQ9UM21 535 aa13.94□□□□□ -0.18
TPM1-226ENST00000560959 LOC100130705A0A1B0GUX0 176 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 IRGMA1A4Y4 181 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 CXorf65A6NEN9 183 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms