RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 NPBQ8NG41 125 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 OR5D18Q8NGL1 313 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 OR52N1Q8NH53 320 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 SNAPC3Q92966 411 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 C10orf35Q96D05 121 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
HERC1-210ENST00000560897 OPALINQ96PE5 141 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 RAB9BQ9NP90 201 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 TECRQ9NZ01 308 aaKnown RBP7.11□□□□□ -1.27
HERC1-210ENST00000560897 APLNQ9ULZ1 77 aa7.11□□□□□ -1.27
HERC1-210ENST00000560897 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 PRR32B1ATL7 298 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 SLC31A2O15432 143 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 SRSF10O75494 262 aaKnown RBP7.1□□□□□ -1.27
HERC1-210ENST00000560897 NDUFA3O95167 84 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 CD2P06729 351 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 UBCP0CG48 685 aaKnown RBP7.1□□□□□ -1.27
HERC1-210ENST00000560897 ZNF20P17024 532 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 CTRB1P17538 263 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 ATF1P18846 271 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
HERC1-210ENST00000560897 ETV1P50549 477 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 ALKBH1Q13686 389 aaKnown RBP7.1□□□□□ -1.27
HERC1-210ENST00000560897 SPHARQ15513 63 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 CCDC58Q4VC31 144 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 CTRB2Q6GPI1 263 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 RPL22L1Q6P5R6 122 aaKnown RBP7.1□□□□□ -1.27
HERC1-210ENST00000560897 ZNF645Q8N7E2 425 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 NANOGP1Q8N7R0 232 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 BVESQ8NE79 360 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 TSPAN14Q8NG11 270 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 OR5AK2Q8NH90 309 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 FCGR1BQ92637 280 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 THRSPQ92748 146 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 UFD1Q92890 307 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 SPSB1Q96BD6 273 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 RITA1Q96K30 269 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 FBXL15Q9H469 300 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 DUSP21Q9H596 190 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 ZC4H2Q9NQZ6 224 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 CLEC2DQ9UHP7 191 aa7.1□□□□□ -1.27
HERC1-210ENST00000560897 TRAV24A0A0B4J272 114 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 TMEM30CPA0ZSE6 113 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 TMEM212A6NML5 194 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 C11orf94C9JXX5 98 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 J3QRE1 110 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 RRHO14718 337 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 MT-ND2P03891 347 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 LIMS3P0CW19 117 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 LIMS4P0CW20 117 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 CELP19835 753 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 PSMB9P28065 219 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 CCR9P51686 369 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 MFAP2P55001 183 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 PAX5Q02548 391 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 CDK5R1Q15078 307 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 OR2G6Q5TZ20 316 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 ZNF773Q6PK81 442 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 SSX6Q7RTT6 188 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 ZNF367Q7RTV3 350 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 NR2C2APQ86WQ0 139 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 SAXO1Q8IYX7 474 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 CENPSQ8N2Z9 138 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 OR10V1Q8NGI7 309 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 PLPPR1Q8TBJ4 325 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 CLCC1Q96S66 551 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 JAM3Q9BX67 310 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 MRPL20Q9BYC9 149 aaKnown RBP7.09□□□□□ -1.27
HERC1-210ENST00000560897 ISG20L2Q9H9L3 353 aaKnown RBP7.09□□□□□ -1.27
HERC1-210ENST00000560897 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
HERC1-210ENST00000560897 PNMA8CA0A1B0GUJ8 204 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 SPINT2O43291 252 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 TRBV12-3P01733 135 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 GSTP1P09211 210 aaKnown RBP7.08□□□□□ -1.28
HERC1-210ENST00000560897 RBMY1A1P0DJD3 496 aaKnown RBP7.08□□□□□ -1.28
HERC1-210ENST00000560897 TMEM225BP0DP42 221 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 EGR2P11161 476 aaPredicted RBP7.08□□□□□ -1.28
HERC1-210ENST00000560897 MAP2K4P45985 399 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 NEDD8Q15843 81 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 TMEM30BQ3MIR4 351 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 ZNF57Q68EA5 555 aaPredicted RBP7.08□□□□□ -1.28
HERC1-210ENST00000560897 LAIR2Q6ISS4 152 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 ZNF343Q6P1L6 599 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 UTS2BQ765I0 119 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 MS4A15Q8N5U1 240 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 OR5T1Q8NG75 326 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 OR13C3Q8NGS6 347 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 OR2G2Q8NGZ5 317 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 GRPEL2Q8TAA5 225 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 GPR148Q8TDV2 347 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 CCDC107Q8WV48 283 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 PELI1Q96FA3 418 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 DPCDQ9BVM2 203 aaPredicted RBP7.08□□□□□ -1.28
HERC1-210ENST00000560897 FKBP14Q9NWM8 211 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms