RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 CCL3L1P16619 93 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 VAMP1P23763 118 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 BTCP35070 178 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 SRSF4Q08170 494 aaKnown RBP9.61□□□□□ -0.87
LDLR-212ENST00000560467 ZNF273Q14593 569 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 C17orf58Q2M2W7 97 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 MORN2Q502X0 79 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 TMEM128Q5BJH2 165 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 PRAMEF5Q5TYX0 476 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 NCR3LG1Q68D85 454 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 Q6ZNX1 250 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 LY6G5BQ8NDX9 201 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 OR9G1Q8NH87 305 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 ZNF596Q8TC21 504 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 TNFRSF14Q92956 283 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 CYYR1Q96J86 154 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 PIPOXQ9P0Z9 390 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 GPR132Q9UNW8 380 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 PSG11Q9UQ72 335 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 POLR3KQ9Y2Y1 108 aaPredicted RBP9.61□□□□□ -0.87
LDLR-212ENST00000560467 KPTNQ9Y664 436 aa9.61□□□□□ -0.87
LDLR-212ENST00000560467 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 A8MXK9 166 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 HSD17B6O14756 317 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 RAB29O14966 203 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 SSNA1O43805 119 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 CREBL2O60519 120 aaPredicted RBP9.6□□□□□ -0.87
LDLR-212ENST00000560467 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 IL5P05113 134 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 IGHV1-8P0DP01 117 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 SPNP16150 400 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 PIGPP57054 158 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 ARF6P62330 175 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 CATR1Q13166 79 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 MSMO1Q15800 293 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 TATDN3Q17R31 274 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 AADACL3Q5VUY0 350 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 ZNF660Q6AZW8 331 aaPredicted RBP9.6□□□□□ -0.87
LDLR-212ENST00000560467 LIN54Q6MZP7 749 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 Q6ZPA2 131 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 SLC25A42Q86VD7 318 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 ABHD14AQ9BUJ0 271 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 RSRP1Q9BUV0 290 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 CLEC7AQ9BXN2 247 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 MS4A7Q9GZW8 240 aaPredicted RBP9.6□□□□□ -0.87
LDLR-212ENST00000560467 TOLLIPQ9H0E2 274 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 TMEM133Q9H2Q1 129 aa9.6□□□□□ -0.87
LDLR-212ENST00000560467 AMMECR1Q9Y4X0 333 aaPredicted RBP9.6□□□□□ -0.87
LDLR-212ENST00000560467 SNRPGP15A8MWD9 76 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 TOX4O94842 621 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 OR4E1P0C645 316 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 ANXA7P20073 488 aaKnown RBP9.59□□□□□ -0.87
LDLR-212ENST00000560467 CEACAM3P40198 252 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 LGALS4P56470 323 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 LOXL3P58215 753 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 SRPXP78539 464 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 PAX8Q06710 450 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 CBX3Q13185 183 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 KCTD9Q7L273 389 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 ABHD12Q8N2K0 398 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 ZNF645Q8N7E2 425 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 C8orf31Q8N9H6 132 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.59□□□□□ -0.87
LDLR-212ENST00000560467 COQ8AQ8NI60 647 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
LDLR-212ENST00000560467 WFDC12Q8WWY7 111 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 UPRTQ96BW1 309 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 PHB2Q99623 299 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 MED28Q9H204 178 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 RNF150Q9ULK6 438 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 FLVCR2Q9UPI3 526 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 VSIG4Q9Y279 399 aa9.59□□□□□ -0.87
LDLR-212ENST00000560467 TANC2Q9HCD6 1990 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 hCG_2014768A0A024R1R8 64 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 TRAV40A0A0B4J280 105 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 C22orf46C9J442 243 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 MPPED1O15442 326 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 ATG12O94817 140 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 HLA-AP01891 365 aaKnown RBP9.58□□□□□ -0.88
LDLR-212ENST00000560467 SERPINE2P07093 398 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 GNRHRP30968 328 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 GNG10P50151 68 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 MECP2P51608 486 aaKnown RBP9.58□□□□□ -0.88
LDLR-212ENST00000560467 DHODHQ02127 395 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 GNMTQ14749 295 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 GLDNQ6ZMI3 551 aaPredicted RBP9.58□□□□□ -0.88
LDLR-212ENST00000560467 UXS1Q8NBZ7 420 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 BVESQ8NE79 360 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 PPP1R14BQ96C90 147 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 ADTRPQ96IZ2 230 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 HSD17B10Q99714 261 aaKnown RBP9.58□□□□□ -0.88
LDLR-212ENST00000560467 OR51J1Q9H342 316 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 C5orf66Q9H5L9 145 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 CCL28Q9NRJ3 127 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms