RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.569e-6■■□□□ 12.6
SPG11-221ENST00000560299 WNK2Q9Y3S1 2297 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 A0A0B4J2A0 478 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 IGHV4-61A0A0C4DH41 118 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 IGHV2-70DA0A0C4DH43 119 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 C3orf85A0A1B0GTC6 90 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 A0A1B0GVG6 124 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 C9orf170A2RU37 121 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 HMX3A6NHT5 357 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 C22orf46C9J442 243 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 J3QR06 171 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 PGLYRP1O75594 196 aaPredicted RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 ATG12O94817 140 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 IFNA21P01568 189 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 SERPINE2P07093 398 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 VSIG10L2P0DP72 767 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CD99P14209 185 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 PRTN3P24158 256 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 F2RP25116 425 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CD34P28906 385 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CEACAM3P40198 252 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 DVL1P1P54792 670 aaPredicted RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 RRAS2P62070 204 aaPredicted RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 ARF6P62330 175 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 PPP1R1AQ13522 171 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CT45A1Q5HYN5 189 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 NCR3LG1Q68D85 454 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 FAM71F2Q6NXP2 309 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 SLC25A48Q6ZT89 311 aaKnown RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 TBC1D26Q86UD7 250 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CADM3Q8N126 398 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 LGI3Q8N145 548 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 LYG1Q8N1E2 194 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 LINC00311Q8N616 119 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 DRAM1Q8N682 238 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 ADAD2Q8NCV1 583 aaKnown RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 CT45A3Q8NHU0 189 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CD300LFQ8TDQ1 290 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CASTOR1Q8WTX7 329 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 MITD1Q8WV92 249 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CAPSLQ8WWF8 208 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 SEC22CQ9BRL7 303 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 AGMATQ9BSE5 352 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 CLEC7AQ9BXN2 247 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 UNKLQ9H9P5 680 aaKnown RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 FAM212BQ9NTI7 297 aaPredicted RBP5.27□□□□□ -1.57
SPG11-221ENST00000560299 SHPKQ9UHJ6 478 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 PRELID3BQ9Y3B1 194 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 NAV3Q8IVL0 2385 aa5.27□□□□□ -1.57
SPG11-221ENST00000560299 IGHV2-26A0A0B4J1V2 119 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 KIAA1324LA8MWY0 1029 aaPredicted RBP5.26□□□□□ -1.57
SPG11-221ENST00000560299 H0Y980 276 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 M0R1X1 148 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 TXNL1O43396 289 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 MMP23AO75900 390 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 TOX4O94842 621 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 IGHV3-7P01780 117 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 MSMBP08118 114 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 RPA2P15927 270 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ZNF16P17020 682 aaPredicted RBP5.26□□□□□ -1.57
SPG11-221ENST00000560299 EPHA1P21709 976 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ZFP36P26651 326 aaKnown RBP5.26□□□□□ -1.57
SPG11-221ENST00000560299 KIR2DS2P43631 304 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 THBS3P49746 956 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 GZMKP49863 264 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 GNG10P50151 68 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ZNF134P52741 427 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 LGALS4P56470 323 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 SLC9A3R2Q15599 337 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 DCAF12L2Q5VW00 463 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 AKAP14Q86UN6 197 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 LDLRAD3Q86YD5 345 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ZNF695Q8IW36 515 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 LINC01356Q8N9X3 169 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ZNF439Q8NDP4 499 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 BEND2Q8NDZ0 799 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 WFDC11Q8NEX6 87 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 OR52B4Q8NGK2 314 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 OR51H1Q8NH63 302 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 CHAC2Q8WUX2 184 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 TCTEX1D2Q8WW35 142 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ASB13Q8WXK3 278 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 LEAP2Q969E1 77 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 TMEM230Q96A57 120 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ABHD14BQ96IU4 210 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 AIFM2Q9BRQ8 373 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 REG4Q9BYZ8 158 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 PARP12Q9H0J9 701 aaKnown RBP5.26□□□□□ -1.57
SPG11-221ENST00000560299 LPAR2Q9HBW0 351 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 SDHAF2Q9NX18 166 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 MXRA5Q9NR99 2828 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ABCA1O95477 2261 aa5.26□□□□□ -1.57
SPG11-221ENST00000560299 ARHGAP32A7KAX9 2087 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 A0A0B4J293 547 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 A0A1W2PPE3 182 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 DUXBA0A1W2PPF3 345 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 LEUTXA8MZ59 168 aa5.25□□□□□ -1.57
SPG11-221ENST00000560299 FAM157AC9JC47 383 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms