RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 DNAH3Q8TD57 4116 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 MEIS3P1A6NDR6 274 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 H3BMQ9 156 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 FGF16O43320 207 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 CD33P20138 364 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 OR3A3P47888 321 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 KHDC1LQ5JSQ8 128 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 LY6G6FQ5SQ64 297 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 WFDC9Q8NEX5 89 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 OR10J5Q8NHC4 309 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 GINS4Q9BRT9 223 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 CABLES2Q9BTV7 478 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 C11orf54Q9H0W9 315 aaPredicted RBP18.39■□□□□ 0.53
CRNDE-209ENST00000560208 IFI27L2Q9H2X8 130 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 RDH8Q9NYR8 311 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 RNF150Q9ULK6 438 aa18.39■□□□□ 0.53
CRNDE-209ENST00000560208 MRPS7Q9Y2R9 242 aaKnown RBP18.39■□□□□ 0.53
CRNDE-209ENST00000560208 PSMB11A5LHX3 300 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 APOA1P02647 267 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 ELK1P19419 428 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 EBI3Q14213 229 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 SRSF7Q16629 238 aaKnown RBP eCLIP18.38■□□□□ 0.53
CRNDE-209ENST00000560208 REC114Q7Z4M0 266 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 ODF3L1Q8IXM7 274 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 GVQW1Q8N7I0 195 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 EDARADDQ8WWZ3 215 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 ABHD14BQ96IU4 210 aa18.38■□□□□ 0.53
CRNDE-209ENST00000560208 SAA2-SAA4A0A096LPE2 208 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 SMIM31A0A1B0GVY4 71 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 PF4P02776 101 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 SAA2P0DJI9 122 aaPredicted RBP18.37■□□□□ 0.53
CRNDE-209ENST00000560208 ZNF137PP52743 207 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 Q6ZS49 121 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 ZNF329Q86UD4 541 aa18.37■□□□□ 0.53
CRNDE-209ENST00000560208 RBMXL1Q96E39 390 aaKnown RBP18.37■□□□□ 0.53
CRNDE-209ENST00000560208 TRBV6-7A0A0A0MS04 114 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 LANCL1O43813 399 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 RPL39P5Q59GN2 51 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 DYNC2LI1Q8TCX1 351 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 EAF1Q96JC9 268 aaPredicted RBP18.36■□□□□ 0.53
CRNDE-209ENST00000560208 CMTM3Q96MX0 182 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 NOL4LQ96MY1 436 aaPredicted RBP18.36■□□□□ 0.53
CRNDE-209ENST00000560208 MRPL20Q9BYC9 149 aaKnown RBP18.36■□□□□ 0.53
CRNDE-209ENST00000560208 NECAP2Q9NVZ3 263 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 PIPOXQ9P0Z9 390 aa18.36■□□□□ 0.53
CRNDE-209ENST00000560208 ZNF736B4DX44 427 aaPredicted RBP18.35■□□□□ 0.53
CRNDE-209ENST00000560208 RGS5O15539 181 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 TXNL1O43396 289 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 IGLL1P15814 213 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 SNX29P2Q8IUI4 249 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 BEST4Q8NFU0 473 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 OR2T10Q8NGZ9 312 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 CHPT1Q8WUD6 406 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 IFT46Q9NQC8 304 aa18.35■□□□□ 0.53
CRNDE-209ENST00000560208 RBM7Q9Y580 266 aaKnown RBP18.35■□□□□ 0.53
CRNDE-209ENST00000560208 NCBP2LA6PVI3 153 aaKnown RBP18.34■□□□□ 0.53
CRNDE-209ENST00000560208 J3QRK9 145 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 ITGB1BP1O14713 200 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 RAB29O14966 203 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 IGHG2P01859 326 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 OR8U9P0C7N5 309 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 ARPC4P59998 168 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 ZNF833PQ6ZTB9 187 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 SLC35E3Q7Z769 313 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 HOGA1Q86XE5 327 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 Q8N6K4 173 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 OR8U1Q8NH10 309 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 S1PR3Q99500 378 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 CCDC59Q9P031 241 aaKnown RBP18.34■□□□□ 0.53
CRNDE-209ENST00000560208 ANXA10Q9UJ72 324 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 LINC00527Q9UJ94 153 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 ZNF221Q9UK13 617 aa18.34■□□□□ 0.53
CRNDE-209ENST00000560208 CD1BP29016 333 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 PRSS3P35030 304 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 CBX5P45973 191 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 GPR12P47775 334 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 CNIH2Q6PI25 160 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 AGMATQ9BSE5 352 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 EXTL2Q9UBQ6 330 aa18.33■□□□□ 0.52
CRNDE-209ENST00000560208 CTDSP2O14595 271 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 DIRAS3O95661 229 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 HLA-DQB1P01920 261 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 CTXN2P0C2S0 81 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 NFYAP23511 347 aaPredicted RBP18.32■□□□□ 0.52
CRNDE-209ENST00000560208 LSAMPQ13449 338 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 FOXB2Q5VYV0 432 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 FOXRED2Q8IWF2 684 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 H1FOOQ8IZA3 346 aaPredicted RBP18.32■□□□□ 0.52
CRNDE-209ENST00000560208 NABP2Q9BQ15 211 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 TOLLIPQ9H0E2 274 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 OR2D2Q9H210 308 aa18.32■□□□□ 0.52
CRNDE-209ENST00000560208 RSL24D1Q9UHA3 163 aaKnown RBP18.32■□□□□ 0.52
CRNDE-209ENST00000560208 LINC01548A6NM66 108 aa18.31■□□□□ 0.52
CRNDE-209ENST00000560208 MOSP00540 346 aa18.31■□□□□ 0.52
CRNDE-209ENST00000560208 RNASE12Q5GAN4 147 aaKnown RBP18.31■□□□□ 0.52
CRNDE-209ENST00000560208 GLDNQ6ZMI3 551 aaPredicted RBP18.31■□□□□ 0.52
CRNDE-209ENST00000560208 LAX1Q8IWV1 398 aa18.31■□□□□ 0.52
CRNDE-209ENST00000560208 Q8N9W7 124 aa18.31■□□□□ 0.52
CRNDE-209ENST00000560208 MRAPQ8TCY5 172 aa18.31■□□□□ 0.52
CRNDE-209ENST00000560208 ZNF251Q9BRH9 671 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms