RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 THBS3P49746 956 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 AP3S2P59780 193 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 HERV-K104P61576 105 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 TSPAN5P62079 268 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF45Q02386 682 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 ATRQ13535 2644 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 MEF2DQ14814 521 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 RNASE10Q5GAN6 216 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 TMEM229BQ8NBD8 167 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 OR4C13Q8NGP0 309 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 OR6Q1Q8NGQ2 317 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 CFHR4Q92496 578 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 SNAPC3Q92966 411 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 RBM14Q96PK6 669 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 HSD17B10Q99714 261 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 EHFQ9NZC4 300 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 MMP24Q9Y5R2 645 aa9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 SOX21Q9Y651 276 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-215ENST00000560207 FAM181BA6NEQ2 426 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 TSPAN9O75954 239 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 PPYP01298 95 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 PTHLHP12272 177 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 TMEM11P17152 192 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 FAUP35544 74 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 ECI1P42126 302 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 LSAMPQ13449 338 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 HES1Q14469 280 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 UTF1Q5T230 341 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 LYSMD2Q8IV50 215 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 DRAM1Q8N682 238 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 OR5AN1Q8NGI8 311 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 OR52I2Q8NH67 350 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 OR56B4Q8NH76 319 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 CYYR1Q96J86 154 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 NABP2Q9BQ15 211 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF251Q9BRH9 671 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 AIFM2Q9BRQ8 373 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 PRSS22Q9GZN4 317 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 BEX1Q9HBH7 125 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 RBMX2Q9Y388 322 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 PRELID3BQ9Y3B1 194 aa9.68□□□□□ -0.86
RABGGTA-215ENST00000560207 TMEM89A2RUT3 159 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 MEIS3P1A6NDR6 274 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 RNF212BA8MTL3 300 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 SNRNP70P08621 437 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 NFYAP23511 347 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 HRH1P35367 487 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 COMPP49747 757 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 RTL8BQ17RB0 113 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF66Q6ZN08 573 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 PDPNQ86YL7 162 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 CMTM1Q8IZ96 169 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 GDPD1Q8N9F7 314 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 S100ZQ8WXG8 99 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 SLC25A33Q9BSK2 321 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 PTTG2Q9NZH5 202 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 KLK11Q9UBX7 282 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 MOB4Q9Y3A3 225 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 WASHC3Q9Y3C0 194 aa9.67□□□□□ -0.86
RABGGTA-215ENST00000560207 IGKV1D-33P01593 117 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 IGKV1-33P01594 117 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CD74P04233 296 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 AKAIN1P0CW23 69 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CT45A6P0DMU7 189 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CT45A5P0DMU8 189 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CT45A7P0DMV0 189 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 HLA-DMAP28067 261 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 KIR2DS2P43631 304 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 LGALS7P47929 136 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 REG1BP48304 166 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 UCP3P55916 312 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CATR1Q13166 79 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 LY6EQ16553 131 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 PYDC2Q56P42 97 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 STEAP1BQ6NZ63 245 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 C5orf24Q7Z6I8 188 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 Q8N402 240 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 OR2T6Q8NHC8 308 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 MOB3AQ96BX8 217 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 ZNF486Q96H40 463 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 SCGB3A2Q96PL1 93 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 THAP7Q9BT49 309 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 C19orf24Q9BVV8 132 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 KIAA1456Q9P272 454 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 RNF150Q9ULK6 438 aa9.66□□□□□ -0.86
RABGGTA-215ENST00000560207 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 H7C2Y5 167 aa9.65□□□□□ -0.86
RABGGTA-215ENST00000560207 M0R1X1 148 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms