RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LFNGQ8NES3 379 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 OR1L1Q8NH94 360 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ABHD5Q8WTS1 349 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 NEURL2Q9BR09 285 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 CCDC90BQ9GZT6 254 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 WFDC10AQ9H1F0 79 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 SLA2Q9H6Q3 261 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ETAA1Q9NY74 926 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 SIGLEC8Q9NYZ4 499 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 IL36GQ9NZH8 169 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ST3GAL6Q9Y274 331 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ANKRD34BA5PLL1 514 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 AIPO00170 330 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 GEMIN2O14893 280 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 TPPPO94811 219 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 HBZP02008 142 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 CD7P09564 240 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 CD37P11049 281 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF93P35789 620 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 RBM11P57052 281 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 PPP3R1P63098 170 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 NHLRC3Q5JS37 347 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 SPARTQ8N0X7 666 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 TMEM203Q969S6 136 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 MUL1Q969V5 352 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 MGLLQ99685 303 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 FAM192AQ9GZU8 254 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 KCNK15Q9H427 330 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 SRD5A3Q9H8P0 318 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 RNF150Q9ULK6 438 aa9.67□□□□□ -0.86
RABGGTA-213ENST00000560127 RRHO14718 337 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 SPINT2O43291 252 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 MAS1P04201 325 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 HSMCR30P0CW71 290 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 OR3A3P47888 321 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 FABP5Q01469 135 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 TMEM30BQ3MIR4 351 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 MORN2Q502X0 79 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 ATAD3CQ5T2N8 411 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 SYT6Q5T7P8 510 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF367Q7RTV3 350 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 UFD1Q92890 307 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 GPER1Q99527 375 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 ABHD14AQ9BUJ0 271 aa9.66□□□□□ -0.86
RABGGTA-213ENST00000560127 PKD1P98161 4303 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 TFAP2AP05549 437 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 CD40LGP29965 261 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 GNMTQ14749 295 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 UBE2UQ5VVX9 321 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF833PQ6ZTB9 187 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 CEACAM19Q7Z692 300 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 MS4A15Q8N5U1 240 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 OR4K15Q8NH41 348 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 NEK7Q8TDX7 302 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 OR2S2Q9NQN1 319 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 NDUFB11Q9NX14 153 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 SLC23A1Q9UHI7 598 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 TRAPPC2LQ9UL33 140 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
RABGGTA-213ENST00000560127 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 RCC1P18754 421 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 SERPINA2P20848 420 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 QRFPP83859 136 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 DYRK1AQ13627 763 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 PLGLAQ15195 96 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 MPV17LQ2QL34 196 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 MOGAT2Q3SYC2 334 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 CD300EQ496F6 205 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 SLC22A6Q4U2R8 563 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 C1orf100Q5SVJ3 147 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 C6orf183Q5T699 404 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 LGALS9CQ6DKI2 356 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 SIGIRRQ6IA17 410 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 ZNF773Q6PK81 442 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 GLIPR1L1Q6UWM5 242 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 FAM131AQ6UXB0 335 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 C5orf24Q7Z6I8 188 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 LINC00596Q86U02 117 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 LAX1Q8IWV1 398 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 JAGN1Q8N5M9 183 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 OR52L2PQ8NGH6 319 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 PHYHIPQ92561 330 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 CPNE2Q96FN4 548 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 Q9H521 79 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 RAB9BQ9NP90 201 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 CKLFQ9UBR5 152 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 ING4Q9UNL4 249 aa9.64□□□□□ -0.87
RABGGTA-213ENST00000560127 SAA2-SAA4A0A096LPE2 208 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms