RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ECDO95905 644 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 TGFAP01135 160 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 IGLV2-14P01704 120 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 IFNA6P05013 189 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 HEXAP06865 529 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ANXA7P20073 488 aaKnown RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 ZBTB25P24278 435 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 SLC6A1P30531 599 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 AP3S2P59780 193 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 SSBP1Q04837 148 aaKnown RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 MEF2DQ14814 521 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 RGS21Q2M5E4 152 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 MORN2Q502X0 79 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ACTBL2Q562R1 376 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 OR2B11Q5JQS5 317 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 DCAF12L2Q5VW00 463 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 FAHD2BQ6P2I3 314 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 PRSS57Q6UWY2 283 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 HEPN1Q6WQI6 88 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 BRD3OSQ6XYD6 125 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 GLDNQ6ZMI3 551 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 ZNF818PQ6ZRF7 136 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TMED4Q7Z7H5 227 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 LHFPL1Q86WI0 220 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ODF3L1Q8IXM7 274 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 DYNAPQ8N1N2 210 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ABHD12Q8N2K0 398 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 CENPSQ8N2Z9 138 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ZNF565Q8N9K5 539 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 DRAXINQ8NBI3 349 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 ZNF439Q8NDP4 499 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 OR52B4Q8NGK2 314 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ENKURQ8TC29 256 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 CAPSLQ8WWF8 208 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TNFRSF14Q92956 283 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 MOB3AQ96BX8 217 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 FAHD2AQ96GK7 314 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 ABHD14AQ9BUJ0 271 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 SLC5A7Q9GZV3 580 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 C20orf85Q9H1P6 137 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TMEM133Q9H2Q1 129 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 NUDT15Q9NV35 164 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TAS2R8Q9NYW2 309 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TAS2R3Q9NYW6 316 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 RABL2AQ9UBK7 228 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 OPN4Q9UHM6 478 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 JPT1Q9UK76 154 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 RABL2BQ9UNT1 228 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 RBM7Q9Y580 266 aaKnown RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 SESN1Q9Y6P5 492 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.734e-14■■■■■ 28.5
SPG11-220ENST00000559933 TLN2Q9Y4G6 2542 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 CUBNO60494 3623 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 SAA2-SAA4A0A096LPE2 208 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 IGHV3-72A0A0B4J1Y9 119 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 FAM240BA0A1B0GVZ2 78 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 LINC00473A8K010 186 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 B4DSR2 109 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 M0R1W7 72 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 PROP1O75360 226 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 NDUFB6O95139 128 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 TCRBP04435 133 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 RLN1P04808 185 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ARG1P05089 322 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 SAA2P0DJI9 122 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 AKR1C4P17516 323 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 TBPP20226 339 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 GZMHP20718 246 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 GNRHRP30968 328 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 FAUP35544 74 aaKnown RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 LUMP51884 338 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 DEFA1P59665 94 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 DEFA3P59666 94 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 HERV-K104P61576 105 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 RPL30P62888 115 aaKnown RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 HTD2P86397 168 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 PAX8Q06710 450 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 OXA1LQ15070 435 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 SLC9A3R2Q15599 337 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 SRSF7Q16629 238 aaKnown RBP eCLIP4.22□□□□□ -1.73
SPG11-220ENST00000559933 HLA-DRB5Q30154 266 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 KLF17Q5JT82 389 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 LIN54Q6MZP7 749 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 MZT2BQ6NZ67 158 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 TRAT1Q6PIZ9 186 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 CCBE1Q6UXH8 406 aaPredicted RBP4.22□□□□□ -1.73
SPG11-220ENST00000559933 FAM219AQ8IW50 185 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 LYG1Q8N1E2 194 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ARRDC1Q8N5I2 433 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 KIR3DL3Q8N743 410 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 OR2AK2Q8NG84 335 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 OR4P4Q8NGL7 312 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 OR51H1Q8NH63 302 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 TERB2Q8NHR7 220 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 ZFAND2BQ8WV99 257 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 GIMAP1Q8WWP7 306 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 C22orf15Q8WYQ4 148 aa4.22□□□□□ -1.73
SPG11-220ENST00000559933 TMEM186Q96B77 213 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms