RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TMEM249Q2WGJ8 235 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 HSP90B2PQ58FF3 399 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 PABPC1L2AQ5JQF8 200 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 SPATA31B1PQ5VZV4 182 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 AMTNQ6UX39 209 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 SLC35E3Q7Z769 313 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 LHFPL1Q86WI0 220 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 OR51H1Q8NH63 302 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 ACBD6Q9BR61 282 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 CYSTM1Q9H1C7 97 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 OR51B6Q9H340 312 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 SNX10Q9Y5X0 201 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 KIAA0232Q92628 1395 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 DIDO1Q9BTC0 2240 aaKnown RBP0.64□□□□□ -2.31
CASC4-210ENST00000559550 TRGV5A0A0B4J1U4 118 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 UGT2B11O75310 529 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 ZNF737O75373 536 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 ARL6IP5O75915 188 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 FADS2O95864 444 aaKnown RBP0.63□□□□□ -2.31
CASC4-210ENST00000559550 BPGMP07738 259 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 G6PCP35575 357 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 KCNJ3P48549 501 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 TAS2R45P59539 299 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 XRCC4Q13426 336 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 TMEM155Q4W5P6 130 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 OR8B12Q8NGG6 310 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 CLDND2Q8NHS1 167 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 RNASEH2CQ8TDP1 164 aaKnown RBP0.63□□□□□ -2.31
CASC4-210ENST00000559550 Q96M85 177 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 UGT2B28Q9BY64 529 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 SLC2A9Q9NRM0 540 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 HHLA3Q9XRX5 114 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 ANGPT4Q9Y264 503 aa0.63□□□□□ -2.31
CASC4-210ENST00000559550 FREM1Q5H8C1 2179 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 F5H5K5 113 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 MRASO14807 208 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 PSMG1O95456 288 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 IVLP07476 585 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 HERVK_113P63121 156 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 OR10K2Q6IF99 312 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 ATP5L2Q7Z4Y8 100 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 SPATA12Q7Z6I5 190 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 PACRGLQ8N7B6 248 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 RPS4Y2Q8TD47 263 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 CCDC124Q96CT7 223 aaKnown RBP0.62□□□□□ -2.31
CASC4-210ENST00000559550 SIKE1Q9BRV8 207 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 NKX6-2Q9C056 277 aaPredicted RBP0.62□□□□□ -2.31
CASC4-210ENST00000559550 VCX3BQ9H321 246 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 GLS2Q9UI32 602 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 ROS1P08922 2347 aa0.62□□□□□ -2.31
CASC4-210ENST00000559550 FBN2P35556 2912 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 ZNF469Q96JG9 3925 aaPredicted RBP0.61□□□□□ -2.31
CASC4-210ENST00000559550 TRBV6-5A0A0K0K1A5 114 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 UBE2L6O14933 153 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 SYNGR1O43759 233 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 CD24P25063 80 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 AGTR1P30556 359 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 OR10J1P30954 320 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 STC1P52823 247 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 DLX6P56179 175 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 TAS2R30P59541 319 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 RAB8AP61006 207 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 TMEM258P61165 79 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 CTAG1AP78358 180 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 DAND5Q8N907 189 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 OR51T1Q8NGJ9 327 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 DYNC2LI1Q8TCX1 351 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 SMCR5Q8TEV8 140 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 RNF133Q8WVZ7 376 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 RNASE6Q93091 150 aaKnown RBP0.61□□□□□ -2.31
CASC4-210ENST00000559550 UBQLN4Q9NRR5 601 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 AGPAT3Q9NRZ7 376 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 STK38LQ9Y2H1 464 aa0.61□□□□□ -2.31
CASC4-210ENST00000559550 SOX21Q9Y651 276 aaPredicted RBP0.61□□□□□ -2.31
CASC4-210ENST00000559550 BAZ2BQ9UIF8 2168 aaKnown RBP0.6□□□□□ -2.31
CASC4-210ENST00000559550 BHLHE40O14503 412 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 HBZP02008 142 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 APOA1P02647 267 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 GPX2P18283 190 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 CCR2P41597 374 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 CA7P43166 264 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 CDK9P50750 372 aaKnown RBP0.6□□□□□ -2.31
CASC4-210ENST00000559550 DAD1P61803 113 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 GLO1Q04760 184 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 TMEM267Q0VDI3 215 aaPredicted RBP0.6□□□□□ -2.31
CASC4-210ENST00000559550 NNATQ16517 81 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 UNQ6190/PRO20217Q6UXQ8 127 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 SCGB1D4Q6XE38 83 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 COPS6Q7L5N1 327 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 C1orf174Q8IYL3 243 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 NATD1Q8N6N6 113 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 OR2D3Q8NGH3 330 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 CCDC12Q8WUD4 166 aaPredicted RBP0.6□□□□□ -2.31
CASC4-210ENST00000559550 CYTH2Q99418 400 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 ASCL3Q9NQ33 180 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 MS4A12Q9NXJ0 267 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 NPATQ14207 1427 aa0.6□□□□□ -2.31
CASC4-210ENST00000559550 WDR90Q96KV7 1748 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 IGHV3-64A0A075B6Q5 118 aa0.59□□□□□ -2.31
CASC4-210ENST00000559550 IGKV2-40A0A087WW87 121 aaPredicted RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms