RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TXNL1O43396 289 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 FBP1P09467 338 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 CT45A6P0DMU7 189 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 CT45A5P0DMU8 189 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 CT45A7P0DMV0 189 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 SRD5A1P18405 259 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 LGALS4P56470 323 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 TRIQKQ629K1 86 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 Q6YL49 198 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 OR8H3Q8N146 312 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 LYG1Q8N1E2 194 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 DDB2Q92466 427 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 RSRP1Q9BUV0 290 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 OR2D2Q9H210 308 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
SNRPA1-207ENST00000559309 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 AMY2AP04746 511 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 IL3RAP26951 378 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 IER3P46695 156 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 SURF2Q15527 256 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 SSX2Q16385 188 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 TMEM17Q86X19 198 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 BVESQ8NE79 360 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 AKR1E2Q96JD6 320 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 PRRT1Q99946 306 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
SNRPA1-207ENST00000559309 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 DISC1C4P0D8 188 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 PAX6P26367 422 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 GPR12P47775 334 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 TSPAN5P62079 268 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 SCGB2A2Q13296 93 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 ASAH1Q13510 395 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 PLA1AQ53H76 456 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 FBLN7Q53RD9 439 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 TGIF2LXQ8IUE1 241 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 C22orf15Q8WYQ4 148 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 ZNF486Q96H40 463 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 S1PR3Q99500 378 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 TSC22D3Q99576 134 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 GPR132Q9UNW8 380 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
SNRPA1-207ENST00000559309 CLDN34H7C241 214 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 IFNA6P05013 189 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 CD1BP29016 333 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 ECI1P42126 302 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 RND3P61587 244 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 ZNF57Q68EA5 555 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 Q8N6K4 173 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 RPEQ96AT9 228 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 MRPL20Q9BYC9 149 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
SNRPA1-207ENST00000559309 LINC00473A8K010 186 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 H0YJW9 148 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 TIMM23O14925 209 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 LYRM1O43325 122 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC6A1P30531 599 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 LINC00205P59089 165 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 FXYD4P59646 89 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 HILS1P60008 231 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 HERV-K104P61576 105 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 ZNF66Q6ZN08 573 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC38A6Q8IZM9 456 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SIGLECL1Q8N7X8 197 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SECTM1Q8WVN6 248 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 BORCS5Q969J3 196 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 RTBDNQ9BSG5 229 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SLC5A7Q9GZV3 580 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 C5orf66Q9H5L9 145 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 PALMDQ9NP74 551 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 ESM1Q9NQ30 184 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 ABCB10Q9NRK6 738 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 SCP2D1Q9UJQ7 156 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 POMT1Q9Y6A1 747 aa11.88□□□□□ -0.51
SNRPA1-207ENST00000559309 A0A0A6YYJ9 748 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 GPR31O00270 319 aa11.87□□□□□ -0.51
SNRPA1-207ENST00000559309 VENTXO95231 258 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms