RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 IMMP2LQ96T52 175 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 COPS8Q99627 209 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 GPR21Q99679 349 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 HIST1H2BLQ99880 126 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 PRRT1Q99946 306 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 RASL11BQ9BPW5 248 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 C20orf144Q9BQM9 153 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 MIEN1Q9BRT3 115 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 PBDC1Q9BVG4 233 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SUCNR1Q9BXA5 334 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 POTEKPQ9BYX7 375 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 COA1Q9GZY4 146 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 MAGT1Q9H0U3 335 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SLC35B3Q9H1N7 401 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 ARV1Q9H2C2 271 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 AUNIPQ9H7T9 357 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 FN3KRPQ9HA64 309 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 PXMP2Q9NR77 195 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SLC17A5Q9NRA2 495 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SLC2A9Q9NRM0 540 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 OR5AC2Q9NZP5 309 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SHPKQ9UHJ6 478 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 CRLS1Q9UJA2 301 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 DKKL1Q9UK85 242 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 RPH3ALQ9UNE2 315 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 B9D1Q9UPM9 204 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF337Q9Y3M9 751 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 SPACA6W5XKT8 324 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 BRCA1P38398 1863 aaKnown RBP2.07□□□□□ -2.08
VPS13C-208ENST00000559119 DOCK5Q9H7D0 1870 aa2.07□□□□□ -2.08
VPS13C-208ENST00000559119 BTAF1O14981 1849 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 A0A1W2PNV4 684 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 MGAT4DA6NG13 374 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TLCD2A6NGC4 264 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 A6NIN4 97 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 IFITM5A6NNB3 132 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 C17orf51A8MQB3 221 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 LOC730098B7Z3J9 87 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 UMAD1C9J7I0 102 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 C11orf94C9JXX5 98 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 H0YL77 283 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 M0R036 132 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 BHLHE40O14503 412 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF208O43345 1280 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TCF21O43680 179 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TNFSF13O75888 250 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CST4P01036 141 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 PDYNP01213 254 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 IGLV3-25P01717 112 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 IFNA6P05013 189 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 SEC11BP0C7V7 166 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TRGC1P0CF51 173 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CXCL8P10145 99 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 FABP4P15090 132 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 MMP11P24347 488 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 HSD11B1P28845 292 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CD34P28906 385 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 OR10J1P30954 320 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 LPAR6P43657 344 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 OR1E2P47887 323 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CEBPDP49716 269 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ATP5IP56385 69 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-208ENST00000559119 UBE2G2P60604 165 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ACTBP60709 375 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ACTG1P63261 375 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ACTG2P63267 376 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 NTHL1P78549 312 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 IL24Q13007 206 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CHIT1Q13231 466 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 INSL4Q14641 139 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 RAB11BQ15907 218 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ZBTB6Q15916 424 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 PSG3Q16557 428 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TAF9Q16594 264 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CDKN3Q16667 212 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 GUK1Q16774 197 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 HIKESHIQ53FT3 197 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CTSL3PQ5NE16 218 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 TMEM69Q5SWH9 247 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 C1orf185Q5T7R7 199 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 OR2T2Q6IF00 324 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 REEP3Q6NUK4 255 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 PRSS54Q6PEW0 395 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 OPN5Q6U736 354 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ACP7Q6ZNF0 438 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF620Q6ZNG0 422 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 CLEC20AQ6ZU45 233 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 SSX7Q7RTT5 188 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 DPY19L4Q7Z388 723 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 GRINAQ7Z429 371 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 SLC35E3Q7Z769 313 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 LHFPL4Q7Z7J7 247 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 LYG2Q86SG7 212 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ACOT1Q86TX2 421 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 BIVMQ86UB2 503 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 GKN2Q86XP6 184 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 WDFY1Q8IWB7 410 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF683Q8IZ20 524 aa2.06□□□□□ -2.08
VPS13C-208ENST00000559119 GABRG1Q8N1C3 465 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms