RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NUBP2Q9Y5Y2 271 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 ARPC1BO15143 372 aaKnown RBP10.46□□□□□ -0.73
VPS18-203ENST00000558855 LDLRAD4O15165 306 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 RAMP3O60896 148 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 RGS11O94810 467 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 HSMCR30P0CW71 290 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 VEGFCP49767 419 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 OR10A3P58181 314 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 HAPLN4Q86UW8 402 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 OR5AN1Q8NGI8 311 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 UFD1Q92890 307 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 LYSTQ99698 3801 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 ISYNA1Q9NPH2 558 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 ABRACLQ9P1F3 81 aa10.46□□□□□ -0.73
VPS18-203ENST00000558855 SORL1Q92673 2214 aa10.46□□□□□ -0.74
VPS18-203ENST00000558855 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.74
VPS18-203ENST00000558855 A0A0B4J203 849 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 TMEM272A0A1B0GTI8 110 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 RAB29O14966 203 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 IGHV3-11P01762 117 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 OR5H8P0DN80 308 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 PSG5Q15238 335 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 SSX1Q16384 188 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 HES5Q5TA89 166 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 TMEM65Q6PI78 240 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 MAFIPQ8WZ33 124 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 TOLLIPQ9H0E2 274 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 PLGRKTQ9HBL7 147 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 STEAP1Q9UHE8 339 aa10.45□□□□□ -0.74
VPS18-203ENST00000558855 ZNF256Q9Y2P7 627 aaPredicted RBP10.45□□□□□ -0.74
VPS18-203ENST00000558855 OR5H14A6NHG9 310 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 ITGB1BP1O14713 200 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 OVOL1O14753 267 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CA2P00918 260 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 OR8U8P0C7N1 319 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 ARSBP15848 533 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 SPNP16150 400 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CPEP16870 476 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CRHBPP24387 322 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CALRP27797 417 aaKnown RBP10.44□□□□□ -0.74
VPS18-203ENST00000558855 CEACAM6P40199 344 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 PJVKQ0ZLH3 352 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 RAB11BQ15907 218 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 MRGPRG-AS1Q2M3A8 158 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 C2orf76Q3KRA6 126 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 ARPC1AQ92747 370 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 MS4A10Q96PG2 267 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CHCHD6Q9BRQ6 235 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 KIAA1456Q9P272 454 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 METTL1Q9UBP6 276 aaKnown RBP10.44□□□□□ -0.74
VPS18-203ENST00000558855 ELF5Q9UKW6 265 aaPredicted RBP10.44□□□□□ -0.74
VPS18-203ENST00000558855 HSF4Q9ULV5 492 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
VPS18-203ENST00000558855 WASHC3Q9Y3C0 194 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 LRRC42Q9Y546 428 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 U3KQK5 164 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 CSMD3Q7Z407 3707 aa10.44□□□□□ -0.74
VPS18-203ENST00000558855 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 H7C2Y5 167 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 RGS10O43665 173 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 LY86O95711 162 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 IGLV2-23P01705 113 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 LGALS1P09382 135 aaKnown RBP10.43□□□□□ -0.74
VPS18-203ENST00000558855 MLLT11Q13015 90 aaPredicted RBP10.43□□□□□ -0.74
VPS18-203ENST00000558855 IGSF11Q5DX21 431 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 ZNF660Q6AZW8 331 aaPredicted RBP10.43□□□□□ -0.74
VPS18-203ENST00000558855 CD200R1LQ6Q8B3 271 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 OVCH2Q7RTZ1 564 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 PPP1R27Q86WC6 154 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 LFNGQ8NES3 379 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 ABHD5Q8WTS1 349 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 PTX4Q96A99 478 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 FAM3DQ96BQ1 224 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 MGLLQ99685 303 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 C12orf4Q9NQ89 552 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 SCN3BQ9NY72 215 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 RDH8Q9NYR8 311 aa10.43□□□□□ -0.74
VPS18-203ENST00000558855 IGKV1D-8A0A087WSZ0 117 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 SMIM30A4D0T7 59 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 TRIM64CA6NLI5 447 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 SLC25A17O43808 307 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
VPS18-203ENST00000558855 GSTP1P09211 210 aaKnown RBP10.42□□□□□ -0.74
VPS18-203ENST00000558855 ZBTB25P24278 435 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 PLGLAQ15195 96 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 CMSS1Q9BQ75 279 aaKnown RBP10.42□□□□□ -0.74
VPS18-203ENST00000558855 URM1Q9BTM9 101 aaKnown RBP10.42□□□□□ -0.74
VPS18-203ENST00000558855 CCDC90BQ9GZT6 254 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 VCXQ9H320 206 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 ZNF230Q9UIE0 474 aaPredicted RBP10.42□□□□□ -0.74
VPS18-203ENST00000558855 ADAM30Q9UKF2 790 aa10.42□□□□□ -0.74
VPS18-203ENST00000558855 TRDCB7Z8K6 153 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 LINC01619G3V211 115 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 M0R1X1 148 aa10.41□□□□□ -0.74
VPS18-203ENST00000558855 MFNGO00587 321 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms