RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SLC17A3O00476 420 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 UBFD1O14562 309 aaKnown RBP2.11□□□□□ -2.07
CASC4-206ENST00000558847 MRASO14807 208 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 IL3P08700 152 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 COX5BP10606 129 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 CBR1P16152 277 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 MYL12AP19105 171 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 NPPCP23582 126 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 OR10J1P30954 320 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 FUSP35637 526 aaKnown RBP eCLIP2.11□□□□□ -2.07
CASC4-206ENST00000558847 RWDD2BP57060 319 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 LINC00313P59037 77 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 CXCR4P61073 352 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 MLLT11Q13015 90 aaPredicted RBP2.11□□□□□ -2.07
CASC4-206ENST00000558847 GNA13Q14344 377 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 TMEM176BQ3YBM2 270 aaPredicted RBP2.11□□□□□ -2.07
CASC4-206ENST00000558847 PTRHD1Q6GMV3 140 aaKnown RBP2.11□□□□□ -2.07
CASC4-206ENST00000558847 RASL11AQ6T310 242 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 LRRN1Q6UXK5 716 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 TMEM156Q8N614 296 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 OR11H1Q8NG94 326 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 PHOSPHO2Q8TCD6 241 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 CAPZA3Q96KX2 299 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 C20orf166-AS1Q96NR2 134 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 UPK3BQ9BT76 320 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 DERL2Q9GZP9 239 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 AICDAQ9GZX7 198 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 PSORS1C2Q9UIG4 136 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 SNX12Q9UMY4 172 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 POLR1DQ9Y2S0 133 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 POLR3HQ9Y535 204 aaPredicted RBP2.11□□□□□ -2.07
CASC4-206ENST00000558847 ZSWIM8A7E2V4 1837 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 CRB1P82279 1406 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 SMIM23A6NLE4 172 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 C17orf51A8MQB3 221 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 NIPSNAP2O75323 286 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 AHSA1O95433 338 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 TYMSP04818 313 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 ESDP10768 282 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 CPMP14384 443 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 TSPEAR-AS2P59090 65 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 RPS24P62847 133 aaKnown RBP2.1□□□□□ -2.07
CASC4-206ENST00000558847 UBE2IP63279 158 aaKnown RBP2.1□□□□□ -2.07
CASC4-206ENST00000558847 PSG4Q00888 419 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 UAP1Q16222 522 aaPredicted RBP2.1□□□□□ -2.07
CASC4-206ENST00000558847 BATFQ16520 125 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 AMTNQ6UX39 209 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 MSRB3Q8IXL7 192 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 RNF133Q8WVZ7 376 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 SLC35G5Q96KT7 338 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 SPZ1Q9BXG8 430 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 MAP1LC3AQ9H492 121 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 C11orf1Q9H5F2 150 aa2.1□□□□□ -2.07
CASC4-206ENST00000558847 PCYT1BQ9Y5K3 369 aaPredicted RBP2.1□□□□□ -2.07
CASC4-206ENST00000558847 BRD4O60885 1362 aaPredicted RBP2.1□□□□□ -2.07
CASC4-206ENST00000558847 C9orf84Q5VXU9 1444 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 H0Y980 276 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 J3QRE1 110 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 LY6HO94772 140 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 NDUFB2O95178 105 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 CXCL2P19875 107 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 CD200P41217 278 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 BLVRAP53004 296 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 HLA-DRB3P79483 266 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 PLPPR5Q32ZL2 321 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 LPCAT4Q643R3 524 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 ZNF767PQ75MW2 155 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 NAA40Q86UY6 237 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 OR4C16Q8NGL9 310 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 ANKRD36BP1Q96IX9 119 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 OR51I2Q9H344 312 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 FKBP14Q9NWM8 211 aa2.09□□□□□ -2.07
CASC4-206ENST00000558847 PLXNB1O43157 2135 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 A0A1B0GW54 56 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 H3BPC8 53 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 CXCR6O00574 342 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 ISG15P05161 165 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 CXCL3P19876 107 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 GZMHP20718 246 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 AP2S1P53680 142 aaPredicted RBP2.08□□□□□ -2.08
CASC4-206ENST00000558847 TMEM33P57088 247 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 CDKL4Q5MAI5 379 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 FAM78BQ5VT40 261 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 C16orf78Q8WTQ4 265 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.08□□□□□ -2.083e-6■■■■■ 50.8
CASC4-206ENST00000558847 MRPS26Q9BYN8 205 aaKnown RBP2.08□□□□□ -2.08
CASC4-206ENST00000558847 DKKL1Q9UK85 242 aa2.08□□□□□ -2.08
CASC4-206ENST00000558847 TMEM235A6NFC5 223 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 DISC1C4P0D8 188 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 ZNF878C9JN71 531 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 UBE2L6O14933 153 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 ACOX3O15254 700 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 HLA-DRAP01903 254 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 GZMBP10144 247 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 CRHBPP24387 322 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 DAPP51397 102 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 PPP1R1AQ13522 171 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 BAP18Q8IXM2 172 aa2.07□□□□□ -2.08
CASC4-206ENST00000558847 C10orf67Q8IYJ2 551 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms