RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DTX2Q86UW9 622 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CCL17Q92583 94 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CORO2AQ92828 525 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 GPR146Q96CH1 333 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 BSCL2Q96G97 398 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-207ENST00000558763 IFI27L2Q9H2X8 130 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 PPIAL4EA0A075B759 164 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 LINC00473A8K010 186 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 LEUTXA8MZ59 168 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 E5RGE8 158 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 F5H0A9 414 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-207ENST00000558763 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 TMPRSS2O15393 492 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 ST8SIA3O43173 380 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 SERPINE2P07093 398 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 P0C879 139 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 PPIAL4FP0DN26 164 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 SLC25A6P12236 298 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 RPL12P30050 165 aaKnown RBP10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CDKN1AP38936 164 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 LINC00205P59089 165 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 IZUMO4Q1ZYL8 232 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 C1orf87Q8N0U7 546 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 NRGNQ92686 78 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 LSM10Q969L4 123 aaKnown RBP10.68□□□□□ -0.7
SMAD3-207ENST00000558763 SPIN2AQ99865 258 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 SPIN2BQ9BPZ2 258 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CTSZQ9UBR2 303 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 PPIAL4AQ9Y536 164 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 SLC31A2O15432 143 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 MMP23AO75900 390 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 TMEM50AO95807 157 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 LYPD2Q6UXB3 125 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 C1orf229Q6ZS94 237 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-207ENST00000558763 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF439Q8NDP4 499 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 FAM216AQ8WUB2 273 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 DOCK11Q5JSL3 2073 aa10.67□□□□□ -0.7
SMAD3-207ENST00000558763 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 S100A1P23297 94 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 NKX2-1P43699 371 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-207ENST00000558763 PPOXP50336 477 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMAD3-207ENST00000558763 SMCO1Q147U7 214 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 FAM74A1Q5RGS3 127 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 PLEKHA2Q9HB19 425 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 C19orf12Q9NSK7 152 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 ZFP57Q9NU63 452 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 IGHV1-69-2A0A0G2JMI3 117 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 A0A1B0GU03 582 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 ANKRD34BA5PLL1 514 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 NKX6-3A6NJ46 265 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 RNF212BA8MTL3 300 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 ITGB1BP1O14713 200 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 P2RY1P47900 373 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF273Q14593 569 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 Q3ZCU0 254 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 CXorf58Q96LI9 332 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 SLC25A10Q9UBX3 287 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-207ENST00000558763 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 APCP25054 2843 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 POLQO75417 2590 aa10.66□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF729A6NN14 1252 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 IGHV3-7P01780 117 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 RRASP10301 218 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF16P17020 682 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 NUP62P37198 522 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 TMEM33P57088 247 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 RPL7L1Q6DKI1 246 aaKnown RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF66Q6ZN08 573 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 LEAP2Q969E1 77 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 CCL19Q99731 98 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 MAGT1Q9H0U3 335 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 FAM212BQ9NTI7 297 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-207ENST00000558763 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 SPG11Q96JI7 2443 aa10.65□□□□□ -0.7
SMAD3-207ENST00000558763 LY6HO94772 140 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 EPHA1P21709 976 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 LPAR6P43657 344 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 PAX9P55771 341 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 OR2B11Q5JQS5 317 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 THOC7Q6I9Y2 204 aaKnown RBP10.65□□□□□ -0.71
SMAD3-207ENST00000558763 CLEC9AQ6UXN8 241 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 BAP18Q8IXM2 172 aa10.65□□□□□ -0.71
SMAD3-207ENST00000558763 HSD17B10Q99714 261 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms