RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GHITMQ9H3K2 345 aa14□□□□□ -0.17
TPM1-214ENST00000558544 IGKV1D-13A0A0B4J2D9 117 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 A6NDX4 124 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 FAM181BA6NEQ2 426 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 ZNF736B4DX44 427 aaPredicted RBP13.99□□□□□ -0.17
TPM1-214ENST00000558544 IGKV1-13P0DP09 117 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 DYRK1AQ13627 763 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 HES1Q14469 280 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 HABP2Q14520 560 aaPredicted RBP13.99□□□□□ -0.17
TPM1-214ENST00000558544 PYDC2Q56P42 97 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.99□□□□□ -0.17
TPM1-214ENST00000558544 FAM216AQ8WUB2 273 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 RBMXL1Q96E39 390 aaKnown RBP13.99□□□□□ -0.17
TPM1-214ENST00000558544 SDHCQ99643 169 aaPredicted RBP13.99□□□□□ -0.17
TPM1-214ENST00000558544 NABP2Q9BQ15 211 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 SDHAF2Q9NX18 166 aa13.99□□□□□ -0.17
TPM1-214ENST00000558544 FAM90A9PA6NNJ1 464 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 M0QYG6 137 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 GSTZ1O43708 216 aaPredicted RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 CHST1O43916 411 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 PROP1O75360 226 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 PPYP01298 95 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 IGKV1D-33P01593 117 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 IGKV1-33P01594 117 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 CD3DP04234 171 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 CD40LGP29965 261 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 PPP5CP53041 499 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 FXYD4P59646 89 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 SSBP1Q04837 148 aaKnown RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 ACTBL2Q562R1 376 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 GLDNQ6ZMI3 551 aaPredicted RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 TAF15Q92804 592 aaKnown RBP eCLIP13.98□□□□□ -0.17
TPM1-214ENST00000558544 ZNF2Q9BSG1 426 aaPredicted RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 PITPNC1Q9UKF7 332 aa13.98□□□□□ -0.17
TPM1-214ENST00000558544 RBMX2Q9Y388 322 aaKnown RBP13.98□□□□□ -0.17
TPM1-214ENST00000558544 M0R1X1 148 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 CT45A6P0DMU7 189 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 CT45A5P0DMU8 189 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 CT45A7P0DMV0 189 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 PTBP1P26599 531 aaKnown RBP eCLIP13.97□□□□□ -0.175e-7■■■□□ 15.6
TPM1-214ENST00000558544 TAS2R19P59542 299 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 HERV-K104P61576 105 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 ZNF660Q6AZW8 331 aaPredicted RBP13.97□□□□□ -0.17
TPM1-214ENST00000558544 LIAT1Q6ZQX7 453 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 ZNF645Q8N7E2 425 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 TMEM229BQ8NBD8 167 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 DRAXINQ8NBI3 349 aaPredicted RBP13.97□□□□□ -0.17
TPM1-214ENST00000558544 SECTM1Q8WVN6 248 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 GIMAP1Q8WWP7 306 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 TINAGL1Q9GZM7 467 aaPredicted RBP13.97□□□□□ -0.17
TPM1-214ENST00000558544 SRRQ9GZT4 340 aa13.97□□□□□ -0.17
TPM1-214ENST00000558544 FAM106CPP0CH98 169 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 TMEM11P17152 192 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 CD1BP29016 333 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 LINC00205P59089 165 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 TSPAN5P62079 268 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 IFITM3Q01628 133 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 HNF4GQ14541 408 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 RNASE10Q5GAN6 216 aaKnown RBP13.96□□□□□ -0.17
TPM1-214ENST00000558544 VAX1Q5SQQ9 334 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 DHRS7BQ6IAN0 325 aaPredicted RBP13.96□□□□□ -0.17
TPM1-214ENST00000558544 TMEM17Q86X19 198 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 THNSL2Q86YJ6 484 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 Q8N402 240 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 SLC25A33Q9BSK2 321 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 GAB2Q9UQC2 676 aa13.96□□□□□ -0.17
TPM1-214ENST00000558544 CRYBA1P05813 215 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 CSF1P09603 554 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 TBPP20226 339 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 DHRS11Q6UWP2 260 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 OR4D10Q8NGI6 311 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 OR6F1Q8NGZ6 308 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 EAF1Q96JC9 268 aaPredicted RBP13.96□□□□□ -0.18
TPM1-214ENST00000558544 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.18
TPM1-214ENST00000558544 FXYD6Q9H0Q3 95 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 RAB18Q9NP72 206 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 PALMDQ9NP74 551 aa13.96□□□□□ -0.18
TPM1-214ENST00000558544 ZNF107Q9UII5 783 aaPredicted RBP13.96□□□□□ -0.18
TPM1-214ENST00000558544 RAB3DO95716 219 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 IGLV2-14P01704 120 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 CD74P04233 296 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 EBI3Q14213 229 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 FAAP20Q6NZ36 180 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 ZNF383Q8NA42 475 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 OR2T10Q8NGZ9 312 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 TMEM158Q8WZ71 300 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 TRIM63Q969Q1 353 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 MOB3AQ96BX8 217 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 RBM14Q96PK6 669 aaKnown RBP13.95□□□□□ -0.18
TPM1-214ENST00000558544 C19orf24Q9BVV8 132 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 SLC5A7Q9GZV3 580 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 CCL28Q9NRJ3 127 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 TAS2R8Q9NYW2 309 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 C1RLQ9NZP8 487 aa13.95□□□□□ -0.18
TPM1-214ENST00000558544 ANKRD20A5PA0PJZ0 165 aa13.94□□□□□ -0.18
TPM1-214ENST00000558544 OR5H14A6NHG9 310 aa13.94□□□□□ -0.18
TPM1-214ENST00000558544 RNF212BA8MTL3 300 aa13.94□□□□□ -0.18
TPM1-214ENST00000558544 H0YJW9 148 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms