RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 FAM240BA0A1B0GVZ2 78 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SLC22A5O76082 557 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 IGLV2-14P01704 120 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 PI3P19957 117 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 PAX6P26367 422 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 GNRHRP30968 328 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SRP14P37108 136 aaKnown RBP7.78□□□□□ -1.16
CUX1-216ENST00000558469 ECI1P42126 302 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 REG1BP48304 166 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 UCP3P55916 312 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 BPIFB3P59826 476 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SSX2Q16385 188 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 TPTE2P1Q5T6R2 138 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 MINOS1Q5TGZ0 78 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 LPCAT3Q6P1A2 487 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SLC38A6Q8IZM9 456 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 DYNAPQ8N1N2 210 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 DRAM1Q8N682 238 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.78□□□□□ -1.16
CUX1-216ENST00000558469 OR13C8Q8NGS7 320 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 ZFAND1Q8TCF1 268 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 C22orf15Q8WYQ4 148 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 ST6GALNAC6Q969X2 333 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 RPEQ96AT9 228 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 RSRP1Q9BUV0 290 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 PGPEP1Q9NXJ5 209 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 FAM96BQ9Y3D0 163 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 SOX21Q9Y651 276 aaPredicted RBP7.78□□□□□ -1.16
CUX1-216ENST00000558469 MINOS1-NBL1R4GNA1 71 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 F8P00451 2351 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 MAST4O15021 2626 aa7.78□□□□□ -1.16
CUX1-216ENST00000558469 M0R1X1 148 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 GPR31O00270 319 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 TNFSF12O43508 249 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 PROP1O75360 226 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 NDUFB6O95139 128 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 GAPDHP04406 335 aaKnown RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 SLC6A1P30531 599 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 ZNF137PP52743 207 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 RBMS2Q15434 407 aaKnown RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 ABCA11PQ4W5N1 156 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 PHLDA2Q53GA4 152 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 PLA1AQ53H76 456 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 ZNF833PQ6ZTB9 187 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 NRARPQ7Z6K4 114 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 TGIF2LXQ8IUE1 241 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 CMTM1Q8IZ96 169 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 BCL6BQ8N143 479 aaPredicted RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 DRAXINQ8NBI3 349 aaPredicted RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 ENKURQ8TC29 256 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 RTN4IP1Q8WWV3 396 aaPredicted RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 MALSU1Q96EH3 234 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 C5orf30Q96GV9 206 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 SCGB3A2Q96PL1 93 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 GPHA2Q96T91 129 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 SLC25A21Q9BQT8 299 aaPredicted RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 ZNF251Q9BRH9 671 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 BEX2Q9BXY8 128 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 DPAGT1Q9H3H5 408 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 GPR132Q9UNW8 380 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 GAB2Q9UQC2 676 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 C14orf166Q9Y224 244 aaKnown RBP7.77□□□□□ -1.17
CUX1-216ENST00000558469 VSIG4Q9Y279 399 aa7.77□□□□□ -1.17
CUX1-216ENST00000558469 HIVEP2P31629 2446 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 IGHV1-3A0A0C4DH29 117 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 INAFM1C9JVW0 142 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 TCRBP04435 133 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 RLN1P04808 185 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 CTSDP07339 412 aaPredicted RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 CT45A6P0DMU7 189 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 CT45A5P0DMU8 189 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 CT45A7P0DMV0 189 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 LINC00205P59089 165 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 ZNF816Q0VGE8 651 aaPredicted RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 MSMO1Q15800 293 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 FAM71F2Q6NXP2 309 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 GLDNQ6ZMI3 551 aaPredicted RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 C9orf139Q6ZV77 190 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 TMED4Q7Z7H5 227 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 MOB3BQ86TA1 216 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 ZDHHC22Q8N966 263 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 ZBTB34Q8NCN2 500 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 ADAD2Q8NCV1 583 aaKnown RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 BVESQ8NE79 360 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 ZNF486Q96H40 463 aaPredicted RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 AKR1E2Q96JD6 320 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 RTBDNQ9BSG5 229 aaPredicted RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
CUX1-216ENST00000558469 C5orf66Q9H5L9 145 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 FLVCR2Q9UPI3 526 aa7.76□□□□□ -1.17
CUX1-216ENST00000558469 NAV3Q8IVL0 2385 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 TRAV6A0A075B6T7 132 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 MDFIC2A0A1B0GVS7 189 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 A0A1W2PPI3 338 aa7.75□□□□□ -1.17
CUX1-216ENST00000558469 OOSP1A8MZH6 123 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms