RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TMPRSS5Q9H3S3 457 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 ELOVL5Q9NYP7 299 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 C7orf77A4D0Y5 90 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 COLCA2A8K830 154 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 C9JQL5 133 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 DLL1O00548 723 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 AGFG2O95081 481 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 CLDN1O95832 211 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 IGHV2-70P01814 119 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 ZNF16P17020 682 aaPredicted RBP6.96□□□□□ -1.3
SPG11-209ENST00000558253 WT1P19544 449 aaPredicted RBP6.96□□□□□ -1.3
SPG11-209ENST00000558253 CEACAM8P31997 349 aaPredicted RBP6.96□□□□□ -1.3
SPG11-209ENST00000558253 GABRA2P47869 451 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 GNB2P62879 340 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 COL10A1Q03692 680 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 PNRC1Q12796 327 aaPredicted RBP6.96□□□□□ -1.3
SPG11-209ENST00000558253 FOXF2Q12947 444 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 ALKBH6Q3KRA9 238 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 TMEM41BQ5BJD5 291 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 SPSB3Q6PJ21 355 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 TMEM14EPQ6UXP3 125 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 RBMS3Q6XE24 437 aaKnown RBP6.96□□□□□ -1.3
SPG11-209ENST00000558253 Q6ZR03 302 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 Q6ZRM9 215 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 H2BFWTQ7Z2G1 175 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 SLC35E3Q7Z769 313 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 THNSL2Q86YJ6 484 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 PRR18Q8N4B5 295 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 ZNF525Q8N782 197 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 TMEM217Q8N7C4 229 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 OR52E5Q8NH55 327 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 OR1L1Q8NH94 360 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 LRRC29Q8WV35 223 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 MALSU1Q96EH3 234 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 COQ2Q96H96 371 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 ADTRPQ96IZ2 230 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 CLCC1Q96S66 551 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 GGACTQ9BVM4 153 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 OR2D2Q9H210 308 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 RPS10P5Q9NQ39 176 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 NIT2Q9NQR4 276 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 SIRT7Q9NRC8 400 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 FBXO7Q9Y3I1 522 aa6.96□□□□□ -1.3
SPG11-209ENST00000558253 ARHGAP21Q5T5U3 1957 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 IGLV3-9A0A075B6K5 115 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 A0A0G2JRQ6 117 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 ODAMA1E959 279 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 MKRN2OSH3BPM6 223 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 C15orf65H3BRN8 121 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 M0R036 132 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 F2RL2O00254 374 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 TM4SF5O14894 197 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 TGOLN2O43493 480 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 MPDU1O75352 247 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 ZNF737O75373 536 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 HPRT1P00492 218 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 LHBP01229 141 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 CRYBA1P05813 215 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 NBL1P41271 181 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 NKX6-1P78426 367 aaPredicted RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 AESQ08117 197 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 PDLIM3Q53GG5 364 aaPredicted RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 TMEM88Q6PEY1 159 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 MRGPRGQ86SM5 289 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 CBLN2Q8IUK8 224 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 ODF3L1Q8IXM7 274 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 GCSAMQ8N6F7 178 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 NUP37Q8NFH4 326 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 OR2Z1Q8NG97 314 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 OR10P1Q8NGE3 313 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 CLDND2Q8NHS1 167 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 FAM57AQ8TBR7 257 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 Q8TCH9 128 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 FAM222BQ8WU58 562 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 TMEM147Q9BVK8 224 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 WDR61Q9GZS3 305 aaKnown RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 OPN3Q9H1Y3 402 aaPredicted RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 RBKSQ9H477 322 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 TMEM242Q9NWH2 141 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 CISD1Q9NZ45 108 aaKnown RBP6.95□□□□□ -1.3
SPG11-209ENST00000558253 IL19Q9UHD0 177 aa6.95□□□□□ -1.3
SPG11-209ENST00000558253 MEX3AA1L020 520 aaKnown RBP6.94□□□□□ -1.3
SPG11-209ENST00000558253 C17orf112F2Z3M2 114 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 ZNHIT1O43257 154 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 SRP19P09132 144 aaKnown RBP6.94□□□□□ -1.3
SPG11-209ENST00000558253 GPR12P47775 334 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 ID4P47928 161 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 FHITP49789 147 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 ERVK-16P61578 105 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 DEFA6Q01524 100 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 SLC38A11Q08AI6 406 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 VWC2Q2TAL6 325 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 TMEM249Q2WGJ8 235 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 AWAT1Q58HT5 328 aa6.94□□□□□ -1.3
SPG11-209ENST00000558253 SPANXN5Q5MJ07 72 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms