RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 BUB1B-PAK6H3BSN5 160 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 MPPED1O15442 326 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 APOA2P02652 100 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 IGKV1-13P0DP09 117 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 HOXB4P17483 251 aaPredicted RBP10.11□□□□□ -0.79
TPM1-209ENST00000558072 AKR1C4P17516 323 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 HNF1AP20823 631 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 COX7A1P24310 79 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 RAB13P51153 203 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 RAB25P57735 213 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 KRTAP1-1Q07627 177 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 ZNF818PQ6ZRF7 136 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 ZNF833PQ6ZTB9 187 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 TGIF2LXQ8IUE1 241 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 OR8H3Q8N146 312 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 DRAM1Q8N682 238 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 COQ8AQ8NI60 647 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 NANPQ8TBE9 248 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 LHX4Q969G2 390 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 GALNT14Q96FL9 552 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 C18orf12Q96KH6 178 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 TBX15Q96SF7 602 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 RTBDNQ9BSG5 229 aaPredicted RBP10.11□□□□□ -0.79
TPM1-209ENST00000558072 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 RNF150Q9ULK6 438 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 VSIG4Q9Y279 399 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 CRYM-AS1A6NIL9 109 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 ODF3BA8MYP8 253 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 CD5LO43866 347 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
TPM1-209ENST00000558072 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
TPM1-209ENST00000558072 IFNA2P01563 188 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 SERPINE2P07093 398 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 OR4E1P0C645 316 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 F2RP25116 425 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 ZNF134P52741 427 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
TPM1-209ENST00000558072 BAMBIQ13145 260 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 RTL8BQ17RB0 113 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 DHRS7BQ6IAN0 325 aaPredicted RBP10.1□□□□□ -0.79
TPM1-209ENST00000558072 GLDNQ6ZMI3 551 aaPredicted RBP10.1□□□□□ -0.79
TPM1-209ENST00000558072 LEAP2Q969E1 77 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 PHB2Q99623 299 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
TPM1-209ENST00000558072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.79
TPM1-209ENST00000558072 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 CCDC168Q8NDH2 2452 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 A0A0B4J2A0 478 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 DUXBA0A1W2PPF3 345 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 H0Y980 276 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 RNASEK-C17orf49H0YIS7 233 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 M0R1X1 148 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 NPFFO15130 113 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 RBFOX2O43251 390 aaKnown RBP eCLIP10.09□□□□□ -0.79
TPM1-209ENST00000558072 SFT2D2O95562 160 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 DUS4LO95620 317 aaKnown RBP10.09□□□□□ -0.79
TPM1-209ENST00000558072 HLA-AP01891 365 aaKnown RBP10.09□□□□□ -0.79
TPM1-209ENST00000558072 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
TPM1-209ENST00000558072 VAMP1P23763 118 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 BRS3P32247 399 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
TPM1-209ENST00000558072 LYG2Q86SG7 212 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 LDLRAD3Q86YD5 345 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 OR4P4Q8NGL7 312 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 TCTEX1D2Q8WW35 142 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 TMEM160Q9NX00 188 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 SHPKQ9UHJ6 478 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
TPM1-209ENST00000558072 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 ITPR3Q14573 2671 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 SLC31A2O15432 143 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 IGHV3-7P01780 117 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 ANXA7P20073 488 aaKnown RBP10.08□□□□□ -0.8
TPM1-209ENST00000558072 DUTP33316 252 aaKnown RBP10.08□□□□□ -0.8
TPM1-209ENST00000558072 TATDN3Q17R31 274 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 UTF1Q5T230 341 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 TPTE2P1Q5T6R2 138 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 Q6ZNX1 250 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 Q71RC1 249 aaPredicted RBP10.08□□□□□ -0.8
TPM1-209ENST00000558072 PDPNQ86YL7 162 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 LGI3Q8N145 548 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 OR4S2Q8NH73 311 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 ZNF431Q8TF32 576 aaPredicted RBP10.08□□□□□ -0.8
TPM1-209ENST00000558072 ST6GALNAC6Q969X2 333 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 RNF5Q99942 180 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 PARP12Q9H0J9 701 aaKnown RBP10.08□□□□□ -0.8
TPM1-209ENST00000558072 CACFD1Q9UGQ2 172 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 NUP50Q9UKX7 468 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 FLVCR2Q9UPI3 526 aa10.08□□□□□ -0.8
TPM1-209ENST00000558072 FAM96BQ9Y3D0 163 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms