RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 SMIM30A4D0T7 59 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 NOTOA8MTQ0 251 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 H0YJW9 148 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 FABP7O15540 132 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 GSTP1P09211 210 aaKnown RBP13.08□□□□□ -0.32
NEDD4-212ENST00000557845 GSTT2P0CG29 244 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 GSTT2BP0CG30 244 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 OR5H8P0DN80 308 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 HIST1H1DP16402 221 aaKnown RBP13.08□□□□□ -0.32
NEDD4-212ENST00000557845 SERPINB10P48595 397 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 KIR2DS1Q14954 304 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 TPRA1Q86W33 373 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
NEDD4-212ENST00000557845 P2RX4Q99571 388 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 RNF5Q99942 180 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 ATG5Q9H1Y0 275 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
NEDD4-212ENST00000557845 WASHC3Q9Y3C0 194 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
NEDD4-212ENST00000557845 G3V318 75 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 H7C2Y5 167 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 ATP6V0E1O15342 81 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 PSMB8P28062 276 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
NEDD4-212ENST00000557845 IGSF11Q5DX21 431 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 OR51E2Q9H255 320 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
NEDD4-212ENST00000557845 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
NEDD4-212ENST00000557845 TRBV6-7A0A0A0MS04 114 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 CCL24O00175 119 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 RRHO14718 337 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 BET1O15155 118 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 RBBP9O75884 186 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 LINC00205P59089 165 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 SRSF7Q16629 238 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEDD4-212ENST00000557845 OR10J5Q8NHC4 309 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 DUX3Q96PT4 197 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 CABLES2Q9BTV7 478 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 FBXL15Q9H469 300 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 PARP11Q9NR21 331 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 TGP01266 2768 aa13.06□□□□□ -0.32
NEDD4-212ENST00000557845 TRAV41A0A0B4J266 112 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 FCN1O00602 326 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 DIRAS3O95661 229 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 OR8U9P0C7N5 309 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 TALDO1P37837 337 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 ARL6IP1Q15041 203 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 CDNFQ49AH0 187 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 ZNF660Q6AZW8 331 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-212ENST00000557845 ZNF383Q8NA42 475 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 OR8U1Q8NH10 309 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 MCRIP2Q9BUT9 160 aaKnown RBP13.05□□□□□ -0.32
NEDD4-212ENST00000557845 DAPK2Q9UIK4 370 aa13.05□□□□□ -0.32
NEDD4-212ENST00000557845 ELF5Q9UKW6 265 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-212ENST00000557845 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
NEDD4-212ENST00000557845 DNAH3Q8TD57 4116 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 TFAP2AP05549 437 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 SDC2P34741 201 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 KRTAP10-11P60412 298 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 CX3CL1P78423 397 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
NEDD4-212ENST00000557845 PLGLAQ15195 96 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 TMEM65Q6PI78 240 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 Q6ZS49 121 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.04□□□□□ -0.32
NEDD4-212ENST00000557845 MYOZ3Q8TDC0 251 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 CENPOQ9BU64 300 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
NEDD4-212ENST00000557845 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEDD4-212ENST00000557845 M0R1X1 148 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 IGKV1-16P04430 117 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 SNRPBP14678 240 aaKnown RBP13.03□□□□□ -0.32
NEDD4-212ENST00000557845 CD36P16671 472 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
NEDD4-212ENST00000557845 RPS16P62249 146 aaKnown RBP13.03□□□□□ -0.32
NEDD4-212ENST00000557845 EGFEM1PQ0D2K5 195 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 PSG5Q15238 335 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 NEDD8Q15843 81 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 DEFB136Q30KP8 78 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 KCTD21Q4G0X4 260 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 SFXN4Q6P4A7 337 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 PDPNQ86YL7 162 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 UBE2E2Q96LR5 201 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 SDHAF2Q9NX18 166 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
NEDD4-212ENST00000557845 FBXO7Q9Y3I1 522 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 NUBP2Q9Y5Y2 271 aa13.03□□□□□ -0.32
NEDD4-212ENST00000557845 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 LOC100506127A0A0U1RQW1 187 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms