RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LSAMPQ13449 338 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF57Q68EA5 555 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-213ENST00000557644 RBMS3Q6XE24 437 aaKnown RBP12.3□□□□□ -0.44
NEDD1-213ENST00000557644 MOB3AQ96BX8 217 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 H3BUX3 64 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 HERV-K104P61576 105 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 MOB3BQ86TA1 216 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 GPHA2Q96T91 129 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 S1PR3Q99500 378 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 WDR12Q9GZL7 423 aaKnown RBP12.29□□□□□ -0.44
NEDD1-213ENST00000557644 FXYD6Q9H0Q3 95 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 CCL28Q9NRJ3 127 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 MCUBQ9NWR8 336 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 BAMBIQ13145 260 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF846Q147U1 533 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 LRRC75BQ2VPJ9 315 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 CCDC144NLQ6NUI1 221 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 GLDNQ6ZMI3 551 aaPredicted RBP12.29□□□□□ -0.44
NEDD1-213ENST00000557644 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF645Q8N7E2 425 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 OR51S1Q8NGJ8 323 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF418Q8TF45 676 aaPredicted RBP12.29□□□□□ -0.44
NEDD1-213ENST00000557644 CFHR4Q92496 578 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 GHITMQ9H3K2 345 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
NEDD1-213ENST00000557644 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 M0R1X1 148 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 CT45A6P0DMU7 189 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 CT45A5P0DMU8 189 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 CT45A7P0DMV0 189 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 MEF2DQ14814 521 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 OR8H3Q8N146 312 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 CD40LGP29965 261 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 GNRHRP30968 328 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 INPP1P49441 399 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 AP3S2P59780 193 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 LY6EQ16553 131 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 ZDHHC22Q8N966 263 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 SSMEM1Q8WWF3 244 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 MRGPRFQ96AM1 343 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
NEDD1-213ENST00000557644 TNFSF12O43508 249 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 VENTXO95231 258 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 HILS1P60008 231 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 CCDC32Q9BV29 185 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 ABCB10Q9NRK6 738 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 GAB2Q9UQC2 676 aa12.27□□□□□ -0.44
NEDD1-213ENST00000557644 FAM71F2Q6NXP2 309 aa12.27□□□□□ -0.45
NEDD1-213ENST00000557644 ZNF383Q8NA42 475 aa12.27□□□□□ -0.45
NEDD1-213ENST00000557644 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.27□□□□□ -0.45
NEDD1-213ENST00000557644 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
NEDD1-213ENST00000557644 FAM216AQ8WUB2 273 aa12.27□□□□□ -0.45
NEDD1-213ENST00000557644 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
NEDD1-213ENST00000557644 DISC1C4P0D8 188 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 TXNL1O43396 289 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
NEDD1-213ENST00000557644 DYNLT3P51808 116 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 HABP2Q14520 560 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-213ENST00000557644 CCBE1Q6UXH8 406 aaPredicted RBP12.26□□□□□ -0.45
NEDD1-213ENST00000557644 TMEM219Q86XT9 240 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 LINC00473A8K010 186 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 TCF21O43680 179 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 BRS3P32247 399 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 ARHGDIBP52566 201 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 AANATQ16613 207 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 IDO2Q6ZQW0 420 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 PRIMA1Q86XR5 153 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 OR13C8Q8NGS7 320 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 DPAGT1Q9H3H5 408 aa12.26□□□□□ -0.45
NEDD1-213ENST00000557644 IGKV1D-33P01593 117 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 IGKV1-33P01594 117 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 PI3P19957 117 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
NEDD1-213ENST00000557644 RPL30P62888 115 aaKnown RBP12.25□□□□□ -0.45
NEDD1-213ENST00000557644 IFITM3Q01628 133 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
NEDD1-213ENST00000557644 HNF4GQ14541 408 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 FAM90A9PA6NNJ1 464 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 H0YJW9 148 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 PLA2G10O15496 165 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 SLC22A5O76082 557 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 FAUP35544 74 aaKnown RBP12.25□□□□□ -0.45
NEDD1-213ENST00000557644 HES1Q14469 280 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 PHLDA2Q53GA4 152 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 MARCH1Q8TCQ1 289 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 PRRT1Q99946 306 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 SLC2A8Q9NY64 477 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 TCF19Q9Y242 345 aa12.25□□□□□ -0.45
NEDD1-213ENST00000557644 UPK1BO75841 260 aa12.24□□□□□ -0.45
NEDD1-213ENST00000557644 PGAM2P15259 253 aa12.24□□□□□ -0.45
NEDD1-213ENST00000557644 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms