RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TET3O43151 1660 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SPHKAPQ2M3C7 1700 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 PPLO60437 1756 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 SBF2Q86WG5 1849 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 C2orf16Q68DN1 1984 aa2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TDRD6O60522 2096 aaKnown RBP2.05□□□□□ -2.08
TRAV28-201ENST00000557548 TRAV8-2A0A0B4J237 113 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 IGHV7-4-1A0A0J9YVY3 117 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TEX50A0A1B0GTY4 177 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 A0A1B0GV50 99 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 EXOC1LA0A1B0GW35 172 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 A0A1B0GXF2 115 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 WI2-2373I1.2A0A1W2PRP0 233 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM131LA2VDJ0 1609 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 EVPLLA8MZ36 301 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 KLLNB2CW77 178 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 AGRNO00468 2067 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 PTPRTO14522 1441 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 KIF1BO60333 1816 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 SULT1C4O75897 302 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 CRYGDP07320 174 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 OR5G3P0C626 314 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 COX4I1P13073 169 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 NELFEP18615 380 aaKnown RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 MIPP30301 263 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 AGTR1P30556 359 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 LGALS7P47929 136 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 PPP1CAP62136 330 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 RHOBP62745 196 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 EMX1Q04741 257 aaPredicted RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ARHGEF5Q12774 1597 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TROQ12816 1431 aaPredicted RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 NCOA2Q15596 1464 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 SMIM21Q3B7S5 101 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ACOT6Q3I5F7 207 aaPredicted RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 FBXL19-AS1Q494R0 122 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF684Q5T5D7 378 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 FAM162BQ5T6X4 162 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 N4BP2L1Q5TBK1 243 aaPredicted RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM215Q68D42 235 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 SFXN4Q6P4A7 337 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TBPL2Q6SJ96 375 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TOMM20LQ6UXN7 152 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 IDO2Q6ZQW0 420 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 WDR86Q86TI4 376 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 NAA40Q86UY6 237 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 UBALD2Q8IYN6 164 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 XRN1Q8IZH2 1706 aaKnown RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 C1orf158Q8N1D5 194 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM86BQ8N661 226 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 RTL9Q8NET4 1388 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 OR2M7Q8NG81 312 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 OR4X1Q8NH49 305 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 SPPL2BQ8TCT7 592 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM131Q92545 1883 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 CCL17Q92583 94 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 CLDN23Q96B33 292 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 MRPL48Q96GC5 212 aaKnown RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ACY3Q96HD9 319 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 DIRAS2Q96HU8 199 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 NARS2Q96I59 477 aaKnown RBP2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ANKRD36BP1Q96IX9 119 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 GPER1Q99527 375 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF649Q9BS31 505 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 MARVELD1Q9BSK0 173 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 OR51I2Q9H344 312 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 POMKQ9H5K3 350 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 FAM96AQ9H5X1 160 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ZNF355PQ9NSJ1 428 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TAS2R5Q9NYW4 299 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 IDI2-AS1Q9NZ38 188 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TBX21Q9UL17 535 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 PYCARDQ9ULZ3 195 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 ASB4Q9Y574 426 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 TMEM14AQ9Y6G1 99 aa2.04□□□□□ -2.08
TRAV28-201ENST00000557548 LRP4O75096 1905 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 WNK3Q9BYP7 1800 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 TNS1Q9HBL0 1735 aaKnown RBP2.03□□□□□ -2.08
TRAV28-201ENST00000557548 PLCH1Q4KWH8 1693 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 LAMC1P11047 1609 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 ABCC3O15438 1527 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 PRDM15P57071 1507 aaPredicted RBP2.03□□□□□ -2.08
TRAV28-201ENST00000557548 LRRC7Q96NW7 1537 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 PLA2R1Q13018 1463 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 CNTLNQ9NXG0 1405 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 NRCAMQ92823 1304 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 LOC102724200A0A096LPH7 203 aaPredicted RBP2.03□□□□□ -2.08
TRAV28-201ENST00000557548 A0A0X1KG70 313 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 LOC389332A0A1B0GUA5 103 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 IGSF23A1L1A6 192 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 ARL5CA6NH57 179 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 OR4C46A6NHA9 309 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 FAM183AA6NL82 134 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 LINC00587B1AMM8 73 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 ATP6V1G2-DDX39BF2Z307 99 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 H3BP45 60 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 UPK1AO00322 258 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 UPK2O00526 184 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 GPR75O95800 540 aa2.03□□□□□ -2.08
TRAV28-201ENST00000557548 HLA-DQA1P01909 254 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms