RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DEFB107AQ8IZN7 70 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 BPIFCQ8NFQ6 507 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 OR11H1Q8NG94 326 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 OR4A16Q8NH70 328 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ISOC1Q96CN7 298 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 BORCS8Q96FH0 119 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TM2D3Q9BRN9 247 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ABCG5Q9H222 651 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 MAGIXQ9H6Y5 334 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 EDA2RQ9HAV5 297 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 HMG20AQ9NP66 347 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ISYNA1Q9NPH2 558 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 PSG11Q9UQ72 335 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 AMMECR1Q9Y4X0 333 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 SIRT4Q9Y6E7 314 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGHV3-72A0A0B4J1Y9 119 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGKV1-9A0A0C4DH69 117 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGKV1-12A0A0C4DH73 117 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 KBTBD11-OT1A0A1B0GTJ5 212 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 LOC107986453A0A1B0GWG9 222 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF98A6NK75 572 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 NCBP2LA6PVI3 153 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 HSD17B6O14756 317 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SYT7O43581 403 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 PRAF2O60831 178 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 FKBP6O75344 327 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RPP14O95059 124 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CYB5AP00167 134 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGKV1D-12P01611 117 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGHG4P01861 327 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CSN2P05814 226 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 OR8U8P0C7N1 319 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CGB3P0DN86 165 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CGB7P0DN87 165 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF44P15621 663 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SPNP16150 400 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 PSMB8P28062 276 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 GLP1RP43220 463 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 REG1BP48304 166 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RBP2P50120 134 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 GNG10P50151 68 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RAB7AP51149 207 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ATP1B3P54709 279 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 GNB1P62873 340 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 EBI3Q14213 229 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SPATS1Q496A3 300 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 FAM53AQ6NSI3 398 aaPredicted RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 Q6P435 159 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SSX6Q7RTT6 188 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ERASQ7Z444 233 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 BCDIN3DQ7Z5W3 292 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF429Q86V71 674 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CATSPERDQ86XM0 798 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 LAX1Q8IWV1 398 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SLC35F2Q8IXU6 374 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 HS3ST5Q8IZT8 346 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 Q8N6K4 173 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 Q8N9W7 124 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 OR13A1Q8NGR1 328 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 MYOZ3Q8TDC0 251 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 HAVCR2Q8TDQ0 301 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RFT1Q96AA3 541 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RBMXL1Q96E39 390 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 C4orf36Q96KX1 117 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 OR5B12Q96R08 314 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 HSPB9Q9BQS6 159 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 COMMD4Q9H0A8 199 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RBM38Q9H0Z9 239 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 GNB4Q9HAV0 340 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 ADGRL4Q9HBW9 690 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 NDE1Q9NXR1 346 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 RDH8Q9NYR8 311 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 CALYQ9NYX4 217 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 TVP23BQ9NYZ1 205 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 DIMT1Q9UNQ2 313 aaKnown RBP4.53□□□□□ -1.68
VPS33B-207ENST00000557470 A3GALT2U3KPV4 340 aa4.53□□□□□ -1.68
VPS33B-207ENST00000557470 IGHV1-3A0A0C4DH29 117 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 A0A1W2PPE3 182 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF670-ZNF695F2Z2N8 137 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 F8W036 122 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 I3L521 148 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 M0R129 80 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 HSPB6O14558 160 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 XRCC3O43542 346 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PRKYO43930 277 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 SAP30O75446 220 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 JTBO76095 146 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 CST1P01037 141 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PLA2G1BP04054 148 aaKnown RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 CSN3P07498 182 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 GP9P14770 177 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 VDAC1P21796 283 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PRKACGP22612 351 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 OR3A3P47888 321 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 VEGFCP49767 419 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 SNRPEP62304 92 aaKnown RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 MS4A2Q01362 244 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms