RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 SSR3Q9UNL2 185 aa8.47□□□□□ -1.05
XRCC3-216ENST00000556682 NOTCH3Q9UM47 2321 aa8.47□□□□□ -1.05
XRCC3-216ENST00000556682 A0A075B6Q4 140 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 H0YJW9 148 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 RRHO14718 337 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 FABP7O15540 132 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 NDUFA3O95167 84 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 DIRAS3O95661 229 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 HIST1H1DP16402 221 aaKnown RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 GNB3P16520 340 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 CNTFRP26992 372 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 FGF9P31371 208 aaPredicted RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 RAB25P57735 213 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 CFHR3Q02985 330 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 ARFRP1Q13795 201 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 GLDNQ6ZMI3 551 aaPredicted RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 ETV3LQ6ZN32 361 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 LCNL1Q6ZST4 164 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 C18orf65Q6ZTR6 163 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 OR5AN1Q8NGI8 311 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 P2RX4Q99571 388 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 TSNAXQ99598 290 aaKnown RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 PARP11Q9NR21 331 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 RDH8Q9NYR8 311 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 STUB1Q9UNE7 303 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 KCNK7Q9Y2U2 307 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 RBM7Q9Y580 266 aaKnown RBP8.46□□□□□ -1.06
XRCC3-216ENST00000556682 WSB1Q9Y6I7 421 aa8.46□□□□□ -1.06
XRCC3-216ENST00000556682 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TRAV41A0A0B4J266 112 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 SHISA3A0PJX4 238 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 NOTOA8MTQ0 251 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 RAB27BO00194 218 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 BET1O15155 118 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 ATP6V0E1O15342 81 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 SCGNO76038 276 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 APOA2P02652 100 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TFAP2AP05549 437 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 PSMB8P28062 276 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 CD40LGP29965 261 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TAGLNQ01995 201 aaKnown RBP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 SRSF7Q16629 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 MOGAT2Q3SYC2 334 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TCTEX1D1Q8N7M0 179 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 OR5M8Q8NGP6 311 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 C4orf3Q8WVX3 66 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 RBMXL1Q96E39 390 aaKnown RBP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 RAX2Q96IS3 184 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TOLLIPQ9H0E2 274 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 PARP12Q9H0J9 701 aaKnown RBP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 ATG5Q9H1Y0 275 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 FBXL15Q9H469 300 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 TXNL4BQ9NX01 149 aaKnown RBP8.45□□□□□ -1.06
XRCC3-216ENST00000556682 GAB2Q9UQC2 676 aa8.45□□□□□ -1.06
XRCC3-216ENST00000556682 IGKV1-6A0A0C4DH72 117 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 G3V318 75 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 MFNGO00587 321 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 SPDEFO95238 335 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 FCGR3AP08637 254 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 GSTT2P0CG29 244 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 GSTT2BP0CG30 244 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 PPIFP30405 207 aaKnown RBP8.44□□□□□ -1.06
XRCC3-216ENST00000556682 RAB9AP51151 201 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 EGFEM1PQ0D2K5 195 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 PLA2G7Q13093 441 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 CBX3Q13185 183 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 DCTN2Q13561 401 aaKnown RBP8.44□□□□□ -1.06
XRCC3-216ENST00000556682 ECSCRQ19T08 205 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 ZNF773Q6PK81 442 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 PDPNQ86YL7 162 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 DRAXINQ8NBI3 349 aaPredicted RBP8.44□□□□□ -1.06
XRCC3-216ENST00000556682 ABHD5Q8WTS1 349 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 FLYWCH2Q96CP2 140 aaKnown RBP8.44□□□□□ -1.06
XRCC3-216ENST00000556682 GINS4Q9BRT9 223 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 CABLES2Q9BTV7 478 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 METTL1Q9UBP6 276 aaKnown RBP8.44□□□□□ -1.06
XRCC3-216ENST00000556682 VSIG4Q9Y279 399 aa8.44□□□□□ -1.06
XRCC3-216ENST00000556682 TRBV6-7A0A0A0MS04 114 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 A0A0B4J203 849 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 M0R1X1 148 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 CTXN2P0C2S0 81 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 OR8U9P0C7N5 309 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 DTYMKP23919 212 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
XRCC3-216ENST00000556682 LGALS7P47929 136 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 CX3CL1P78423 397 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 PITPNAQ00169 270 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 DEFB136Q30KP8 78 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 CDNFQ49AH0 187 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 IGSF11Q5DX21 431 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 DEFB121Q5J5C9 76 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 C9orf66Q5T8R8 295 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 PYHIN1Q6K0P9 492 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 ZNF562Q6V9R5 426 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 Q6ZS49 121 aa8.43□□□□□ -1.06
XRCC3-216ENST00000556682 ZNF491Q8N8L2 437 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms