RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PPT1P50897 306 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 DVL1P1P54792 670 aaPredicted RBP8.41□□□□□ -1.06
TMEM260-211ENST00000556648 PAX5Q02548 391 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 SPINK9Q5DT21 86 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 FAM90A1Q86YD7 464 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 ZCCHC24Q8N2G6 241 aaKnown RBP8.41□□□□□ -1.06
TMEM260-211ENST00000556648 ZBTB34Q8NCN2 500 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 RSG1Q9BU20 258 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF835Q9Y2P0 537 aa8.41□□□□□ -1.06
TMEM260-211ENST00000556648 CACNA1DQ01668 2161 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 GATA4P43694 442 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF134P52741 427 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 RPS16P62249 146 aaKnown RBP8.4□□□□□ -1.06
TMEM260-211ENST00000556648 RPS23P62266 143 aaKnown RBP8.4□□□□□ -1.06
TMEM260-211ENST00000556648 HTD2P86397 168 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 TAGLNQ01995 201 aaKnown RBP8.4□□□□□ -1.06
TMEM260-211ENST00000556648 BSPH1Q075Z2 132 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 GUK1Q16774 197 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 MORN2Q502X0 79 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 SPANXN5Q5MJ07 72 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 NCR3LG1Q68D85 454 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 STUMQ69YW2 141 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
TMEM260-211ENST00000556648 TCF23Q7RTU1 214 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 STX12Q86Y82 276 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 ZNF525Q8N782 197 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 FAM216BQ8N7L0 139 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 FAM222BQ8WU58 562 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 GAFA1Q96PS6 74 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 OR4C12Q96R67 309 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 CALYQ9NYX4 217 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 GNG12Q9UBI6 72 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 CLN8Q9UBY8 286 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
TMEM260-211ENST00000556648 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 GYPAP02724 150 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 RAB5CP51148 216 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 LOXL3P58215 753 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 CATR1Q13166 79 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 THNSL2Q86YJ6 484 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 Q8TCH9 128 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 CCL13Q99616 98 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 JKAMPQ9P055 326 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 RNF7Q9UBF6 113 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 DMXL2Q8TDJ6 3036 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 CUL9Q8IWT3 2517 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 TRIM77I1YAP6 450 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 TOR1AO14656 332 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 ADH4P08319 380 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 GPR12P47775 334 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 UBE2KP61086 200 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 CCL8P80075 99 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 TNFRSF9Q07011 255 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 ADIPOQQ15848 244 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 CR1LQ2VPA4 569 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 ADAM5Q6NVV9 412 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 TMEM108Q6UXF1 575 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 NUP37Q8NFH4 326 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 C14orf79Q96F83 325 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 RARRES2Q99969 163 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 IFI27L2Q9H2X8 130 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 HSPB7Q9UBY9 170 aa8.39□□□□□ -1.07
TMEM260-211ENST00000556648 PIGBOS1A0A0B4J2F0 54 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 LRRC30A6NM36 301 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 M0R1X1 148 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 OR9G9P0C7N8 305 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 CGB3P0DN86 165 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 CGB7P0DN87 165 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 TAS2R30P59541 319 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 OR2B8PP59922 312 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 MSMO1Q15800 293 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 EIF5A2Q9GZV4 153 aaKnown RBP8.38□□□□□ -1.07
TMEM260-211ENST00000556648 VSIRQ9H7M9 311 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 SEBOXQ9HB31 216 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-211ENST00000556648 ELOVL5Q9NYP7 299 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 IL19Q9UHD0 177 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 JPT1Q9UK76 154 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 DYSFO75923 2080 aa8.38□□□□□ -1.07
TMEM260-211ENST00000556648 PTPRZ1P23471 2315 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-211ENST00000556648 USF3Q68DE3 2245 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 F2RL2O00254 374 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ZG16O60844 167 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 FCGR3BO75015 233 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 MMP23AO75900 390 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 DFFBO76075 338 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 CLDN14O95500 239 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 CD55P08174 381 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 OR4A8P0C604 315 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms