RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TRBV6-7A0A0A0MS04 114 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 IGHV7-81A0A0B4J1V7 117 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 METTL21EPA6NDL7 271 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 TMEM235A6NFC5 223 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 NBR2O15453 112 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 SSX5O60225 188 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 NDUFA3O95167 84 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 IGKV1-16P04430 117 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 IGF1P05019 195 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 OR8U9P0C7N5 309 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 ARFRP1Q13795 201 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 PNLIPRP3Q17RR3 467 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 C5orf64Q2M2E5 130 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 ZNF260Q3ZCT1 412 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 IDNKQ5T6J7 187 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 TSPAN14Q8NG11 270 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 OR8U1Q8NH10 309 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 NUDCD2Q8WVJ2 157 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 EDARADDQ8WWZ3 215 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 PHF21AQ96BD5 680 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 FBXL15Q9H469 300 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.35□□□□□ -1.39
VTI1B-206ENST00000556461 SDHAF2Q9NX18 166 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 GAB2Q9UQC2 676 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 WSB1Q9Y6I7 421 aa6.35□□□□□ -1.39
VTI1B-206ENST00000556461 H7C2Y5 167 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 J3QRK9 145 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 M0R1X1 148 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 ATP6V0E1O15342 81 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 HLA-DRB1P01911 266 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 PF4P02776 101 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 TFAP2AP05549 437 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
VTI1B-206ENST00000556461 PTHLHP12272 177 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 CD33P20138 364 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 TALDO1P37837 337 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 RANBP1P43487 201 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 THBS3P49746 956 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 LSM3P62310 102 aaKnown RBP6.34□□□□□ -1.39
VTI1B-206ENST00000556461 SLC35B1P78383 322 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 MRPS15P82914 257 aaKnown RBP6.34□□□□□ -1.39
VTI1B-206ENST00000556461 KIAA0141Q14154 515 aaPredicted RBP6.34□□□□□ -1.39
VTI1B-206ENST00000556461 KIR2DS1Q14954 304 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 DEFB136Q30KP8 78 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 HACD4Q5VWC8 232 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 TEX38Q6PEX7 206 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 Q6ZS49 121 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
VTI1B-206ENST00000556461 RNF152Q8N8N0 203 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 KLHL30-AS1Q8NEE0 82 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 ST6GALNAC5Q9BVH7 336 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 OR2D2Q9H210 308 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 KLK15Q9H2R5 256 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 OR51J1Q9H342 316 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 PARP11Q9NR21 331 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 TPSG1Q9NRR2 321 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 RHBDL2Q9NX52 303 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 ZNF221Q9UK13 617 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 WASHC3Q9Y3C0 194 aa6.34□□□□□ -1.39
VTI1B-206ENST00000556461 A0A087WXM4 84 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 OR5H14A6NHG9 310 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 TRIM64CA6NLI5 447 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 RRHO14718 337 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 SOX15O60248 233 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 TNFAIP8O95379 198 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 IGHG4P01861 327 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 SMIM18P0DKX4 95 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 VDAC1P21796 283 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 NFYAP23511 347 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 DTYMKP23919 212 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 PSMB8P28062 276 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 PPIFP30405 207 aaKnown RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 RPS19P39019 145 aaKnown RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 SERPINB10P48595 397 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 CX3CL1P78423 397 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 SSBP2P81877 361 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 FOXE3Q13461 319 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 PSG5Q15238 335 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 SRSF7Q16629 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 C19orf54Q5BKX5 351 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF695Q8IW36 515 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 H1FOOQ8IZA3 346 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 COMMD1Q8N668 190 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 OR10J5Q8NHC4 309 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 CASTOR1Q8WTX7 329 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 RAX2Q96IS3 184 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 CLCC1Q96S66 551 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 P2RX4Q99571 388 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 FAM103A1Q9BTL3 118 aaKnown RBP6.33□□□□□ -1.4
VTI1B-206ENST00000556461 GHITMQ9H3K2 345 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 GNB4Q9HAV0 340 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 ZFP57Q9NU63 452 aa6.33□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms