RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 KAAG1Q9UBP8 84 aa9.12□□□□□ -0.95
CHGA-205ENST00000556098 NUP50Q9UKX7 468 aa9.12□□□□□ -0.95
CHGA-205ENST00000556098 PPIAL4EA0A075B759 164 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 A0A0D9SG52 128 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 C12orf77C9JDV5 145 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 PPIAL4DF5H284 164 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM178BH3BS89 294 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 PPIAL4FP0DN26 164 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 GNRHRP30968 328 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 MEF2CQ06413 473 aaPredicted RBP9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM187Q14656 261 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 SLC9A3R2Q15599 337 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 ZNF767PQ75MW2 155 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 KIR3DL3Q8N743 410 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 THAP6Q8TBB0 222 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 SECTM1Q8WVN6 248 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 CORO2AQ92828 525 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM56Q96MV1 263 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
CHGA-205ENST00000556098 CHIAQ9BZP6 476 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM222Q9H0R3 208 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 METTL8Q9H825 291 aaKnown RBP9.11□□□□□ -0.95
CHGA-205ENST00000556098 LINC00574Q9H8X3 128 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM106BQ9NUM4 274 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 HSPB11Q9Y547 144 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 SOX21Q9Y651 276 aaPredicted RBP9.11□□□□□ -0.95
CHGA-205ENST00000556098 AUP1Q9Y679 476 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TMEM56-RWDD3S4R434 201 aa9.11□□□□□ -0.95
CHGA-205ENST00000556098 TRGV10A0A0A0MS01 117 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 C3orf85A0A1B0GTC6 90 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 MDFIC2A0A1B0GVS7 189 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 ZNF729A6NN14 1252 aaPredicted RBP9.1□□□□□ -0.95
CHGA-205ENST00000556098 G3V3Q6 166 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 F2RL2O00254 374 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 GPR37O15354 613 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 YPEL1O60688 119 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 FOXH1O75593 365 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 ATG12O94817 140 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 OR2F2O95006 317 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 CDS2O95674 445 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 HBZP02008 142 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 SLC25A6P12236 298 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 PI3P19957 117 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 GATA3P23771 443 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 UCP1P25874 307 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 PSMB6P28072 239 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 RAB7AP51149 207 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 NKX2-5P52952 324 aaPredicted RBP9.1□□□□□ -0.95
CHGA-205ENST00000556098 AESQ08117 197 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 CATR1Q13166 79 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 OR2F1Q13607 317 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 ZNF645Q8N7E2 425 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 OR52M1Q8NGK5 317 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 IL1F10Q8WWZ1 152 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 MMP26Q9NRE1 261 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 RDH8Q9NYR8 311 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 TAS2R3Q9NYW6 316 aa9.1□□□□□ -0.95
CHGA-205ENST00000556098 UBE2J1Q9Y385 318 aaPredicted RBP9.1□□□□□ -0.95
CHGA-205ENST00000556098 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
CHGA-205ENST00000556098 IGHV3-64DA0A0J9YX35 117 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 hADV38S2A0JD32 116 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 C15orf65H3BRN8 121 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 L7N2F9 121 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 CRYBA1P05813 215 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 RNASE1P07998 156 aaKnown RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 OR5AC1P0C628 307 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 LYL1P12980 280 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 F2RP25116 425 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 CD80P33681 288 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 NUP62P37198 522 aaPredicted RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 CEACAM6P40199 344 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 CEBPDP49716 269 aaPredicted RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 SMCO1Q147U7 214 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 ANKRD55Q3KP44 614 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 PHLDA2Q53GA4 152 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 ZNF818PQ6ZRF7 136 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 TBC1D26Q86UD7 250 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 BOLLQ8N9W6 283 aaKnown RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 PPP1R1CQ8WVI7 109 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 ARL11Q969Q4 196 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 ZDHHC16Q969W1 377 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 CYYR1Q96J86 154 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 GAFA1Q96PS6 74 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 TMEM246Q9BRR3 403 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 GAL3ST2Q9H3Q3 398 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 GAB2Q9UQC2 676 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
CHGA-205ENST00000556098 MAB21L2Q9Y586 359 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 LINC00312Q9Y6C7 94 aa9.09□□□□□ -0.95
CHGA-205ENST00000556098 TRBV23-1A0A0A0MS06 115 aa9.08□□□□□ -0.96
CHGA-205ENST00000556098 FAM25EA8MYX2 175 aa9.08□□□□□ -0.96
CHGA-205ENST00000556098 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
CHGA-205ENST00000556098 MPC2O95563 127 aa9.08□□□□□ -0.96
CHGA-205ENST00000556098 CYB5R3P00387 301 aaPredicted RBP9.08□□□□□ -0.96
CHGA-205ENST00000556098 FSHBP01225 129 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms