RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TPRKBQ9Y3C4 175 aa8.38□□□□□ -1.07
TDP1-212ENST00000555565 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
TDP1-212ENST00000555565 TNCP24821 2201 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 OR5H14A6NHG9 310 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 H0YJW9 148 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 FCN1O00602 326 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 ITGB1BP1O14713 200 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 RRHO14718 337 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 SOX15O60248 233 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 PROP1O75360 226 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 SCTP09683 121 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 HSMCR30P0CW71 290 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 EGR2P11161 476 aaPredicted RBP8.37□□□□□ -1.07
TDP1-212ENST00000555565 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
TDP1-212ENST00000555565 CX3CL1P78423 397 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 HLA-DRB3P79483 266 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 ZNF616Q08AN1 781 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 ZNF260Q3ZCT1 412 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 OR1N2Q8NGR9 330 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 C11orf54Q9H0W9 315 aaPredicted RBP8.37□□□□□ -1.07
TDP1-212ENST00000555565 GHITMQ9H3K2 345 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 Q9N2K0 584 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 ISYNA1Q9NPH2 558 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 HSF4Q9ULV5 492 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
TDP1-212ENST00000555565 IGKV1-6A0A0C4DH72 117 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 RGS10O43665 173 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ARL6IP5O75915 188 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 OR8U8P0C7N1 319 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
TDP1-212ENST00000555565 CPEP16870 476 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ZBTB25P24278 435 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 CRHBPP24387 322 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 MC5RP33032 325 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 CEACAM6P40199 344 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 VEGFCP49767 419 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 CLDN12P56749 244 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 FABP5Q01469 135 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 MLLT11Q13015 90 aaPredicted RBP8.36□□□□□ -1.07
TDP1-212ENST00000555565 TRAM1Q15629 374 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 RAB11BQ15907 218 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ECSCRQ19T08 205 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ZNF660Q6AZW8 331 aaPredicted RBP8.36□□□□□ -1.07
TDP1-212ENST00000555565 CASTOR1Q8WTX7 329 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 EDARADDQ8WWZ3 215 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 PTX4Q96A99 478 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ARHGAP5-AS1Q96IT6 56 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 PECRQ9BY49 303 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ALX4Q9H161 411 aaPredicted RBP8.36□□□□□ -1.07
TDP1-212ENST00000555565 C12orf4Q9NQ89 552 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 RNF150Q9ULK6 438 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 GAB2Q9UQC2 676 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 ZNF256Q9Y2P7 627 aaPredicted RBP8.36□□□□□ -1.07
TDP1-212ENST00000555565 WASHC3Q9Y3C0 194 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 NUBP2Q9Y5Y2 271 aa8.36□□□□□ -1.07
TDP1-212ENST00000555565 A0A1W2PN81 502 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 H7C2Y5 167 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 LDLRAD4O15165 306 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 HSPA12AO43301 675 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 RBBP9O75884 186 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 GSTP1P09211 210 aaKnown RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 PSMA1P25786 263 aaKnown RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 CHRNA7P36544 502 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 MAP2K4P45985 399 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 INSL3P51460 131 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 LINC00205P59089 165 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 PLA2G7Q13093 441 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 PLGLAQ15195 96 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 C2orf76Q3KRA6 126 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 PLAC9Q5JTB6 97 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 CD200R1LQ6Q8B3 271 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 PRSS48Q7RTY5 328 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 OVCH2Q7RTZ1 564 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 DRAXINQ8NBI3 349 aaPredicted RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 DCUN1D4Q92564 292 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 FAM3DQ96BQ1 224 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 MGLLQ99685 303 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 CMSS1Q9BQ75 279 aaKnown RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 CCDC90BQ9GZT6 254 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 TPSG1Q9NRR2 321 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 MGAT4AQ9UM21 535 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
TDP1-212ENST00000555565 A3GALT2U3KPV4 340 aa8.35□□□□□ -1.07
TDP1-212ENST00000555565 DENRO43583 198 aaKnown RBP8.34□□□□□ -1.07
TDP1-212ENST00000555565 FRMD6-AS1P0C7T7 363 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 PSG5Q15238 335 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 TCTEX1D1Q8N7M0 179 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 ZNF383Q8NA42 475 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 OR56B1Q8NGI3 324 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 DLX4Q92988 240 aaPredicted RBP8.34□□□□□ -1.07
TDP1-212ENST00000555565 CLCC1Q96S66 551 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 RNF5Q99942 180 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 FAM103A1Q9BTL3 118 aaKnown RBP8.34□□□□□ -1.07
TDP1-212ENST00000555565 TOLLIPQ9H0E2 274 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 ACOT13Q9NPJ3 140 aa8.34□□□□□ -1.07
TDP1-212ENST00000555565 METTL1Q9UBP6 276 aaKnown RBP8.34□□□□□ -1.07
TDP1-212ENST00000555565 KCNK7Q9Y2U2 307 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms