RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 IFNA6P05013 189 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 GPR12P47775 334 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 UCP3P55916 312 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 AP3S2P59780 193 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 TSPAN5P62079 268 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 BAMBIQ13145 260 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 LSAMPQ13449 338 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 EBI3Q14213 229 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 SLC9A3R2Q15599 337 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 PLA1AQ53H76 456 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 AADACL3Q5VUY0 350 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 TMEM17Q86X19 198 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 TOMM5Q8N4H5 51 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF645Q8N7E2 425 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 ZDHHC22Q8N966 263 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 ZBTB34Q8NCN2 500 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 OR5R1Q8NH85 324 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 AKR1E2Q96JD6 320 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 CCDC32Q9BV29 185 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 OR2D2Q9H210 308 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
SYNE2-219ENST00000555323 RBM7Q9Y580 266 aaKnown RBP10.2□□□□□ -0.78
SYNE2-219ENST00000555323 OR5H14A6NHG9 310 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 TIMM23O14925 209 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 IGHV4-59P01825 116 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 CD1BP29016 333 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 GNRHRP30968 328 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 REG1BP48304 166 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 RAB13P51153 203 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 EIF4EBP1Q13541 118 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-219ENST00000555323 RPL39P5Q59GN2 51 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 DRAM1Q8N682 238 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 OR4C16Q8NGL9 310 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 TERB2Q8NHR7 220 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 C5orf30Q96GV9 206 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 WDR12Q9GZL7 423 aaKnown RBP10.19□□□□□ -0.78
SYNE2-219ENST00000555323 SLC2A8Q9NY64 477 aa10.19□□□□□ -0.78
SYNE2-219ENST00000555323 CUBNO60494 3623 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 DISC1C4P0D8 188 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 H3BUX3 64 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 J3QRK9 145 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 VENTXO95231 258 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 IL7P13232 177 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 MC5RP33032 325 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF846Q147U1 533 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 LPCAT3Q6P1A2 487 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 BVESQ8NE79 360 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 BORCS5Q969J3 196 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 SLC5A7Q9GZV3 580 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 HRASLSQ9HDD0 168 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 CCL28Q9NRJ3 127 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 ABCB10Q9NRK6 738 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 TCF19Q9Y242 345 aa10.18□□□□□ -0.78
SYNE2-219ENST00000555323 A6NDX4 124 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 AMY2AP04746 511 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 DUTP33316 252 aaKnown RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 FAUP35544 74 aaKnown RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 FXYD4P59646 89 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 HERV-K104P61576 105 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 TAGLNQ01995 201 aaKnown RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 TRIQKQ629K1 86 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 C16orf87Q6PH81 154 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 CCBE1Q6UXH8 406 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF66Q6ZN08 573 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 LIAT1Q6ZQX7 453 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF383Q8NA42 475 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 SECTM1Q8WVN6 248 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 DDB2Q92466 427 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 MRGPRFQ96AM1 343 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 ADTRPQ96IZ2 230 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 PRRT1Q99946 306 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 RSRP1Q9BUV0 290 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 MRPL20Q9BYC9 149 aaKnown RBP10.17□□□□□ -0.78
SYNE2-219ENST00000555323 PITPNC1Q9UKF7 332 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
SYNE2-219ENST00000555323 BTBD17A6NE02 478 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 H0YJW9 148 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 M0R1X1 148 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 ECI1P42126 302 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 THBS3P49746 956 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 LINC00205P59089 165 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 RPL15P61313 204 aaKnown RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 UBA52P62987 128 aaKnown RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 SURF2Q15527 256 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-219ENST00000555323 FAAP20Q6NZ36 180 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 ZNF818PQ6ZRF7 136 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 SLC38A6Q8IZM9 456 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 Q8N6K4 173 aa10.16□□□□□ -0.78
SYNE2-219ENST00000555323 OR51S1Q8NGJ8 323 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms