RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 FAAP20Q6NZ36 180 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 IDO2Q6ZQW0 420 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF833PQ6ZTB9 187 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 DYNAPQ8N1N2 210 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF645Q8N7E2 425 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 RTN4IP1Q8WWV3 396 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-215ENST00000554997 RPEQ96AT9 228 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 RSRP1Q9BUV0 290 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SLC5A7Q9GZV3 580 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 OR2D2Q9H210 308 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 CCL28Q9NRJ3 127 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SDHAF2Q9NX18 166 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 VGLL3A8MV65 326 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 HSD17B6O14756 317 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 TXNL1O43396 289 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 DYNLT3P51808 116 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 FXYD4P59646 89 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 ASAH1Q13510 395 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 SURF2Q15527 256 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-215ENST00000554997 RPL39P5Q59GN2 51 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 Q6YL49 198 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 SLC38A6Q8IZM9 456 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 OR8H3Q8N146 312 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 BVESQ8NE79 360 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 OR13C8Q8NGS7 320 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 ZFAND1Q8TCF1 268 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 SECTM1Q8WVN6 248 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 C22orf15Q8WYQ4 148 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 TOMM40LQ969M1 308 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 MRGPRFQ96AM1 343 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 SCGB3A2Q96PL1 93 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-215ENST00000554997 GPR132Q9UNW8 380 aa8.23□□□□□ -1.09
SYNE2-215ENST00000554997 NSD1Q96L73 2696 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-215ENST00000554997 IGHV1-3A0A0C4DH29 117 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 FAM90A9PA6NNJ1 464 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 GPR31O00270 319 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 LYRM1O43325 122 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 FAM157CP0CG43 387 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 BRS3P32247 399 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 MC5RP33032 325 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 REG1BP48304 166 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 ARHGDIBP52566 201 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
SYNE2-215ENST00000554997 EIF4EBP1Q13541 118 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-215ENST00000554997 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-215ENST00000554997 MZT2BQ6NZ67 158 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF818PQ6ZRF7 136 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 THNSL2Q86YJ6 484 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 CMTM1Q8IZ96 169 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 DRAM1Q8N682 238 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 PIFOQ8TCI5 191 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 MARCH1Q8TCQ1 289 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 ZDHHC16Q969W1 377 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF486Q96H40 463 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-215ENST00000554997 TBC1D24Q9ULP9 559 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 SVEP1Q4LDE5 3571 aa8.22□□□□□ -1.09
SYNE2-215ENST00000554997 HIVEP2P31629 2446 aa8.21□□□□□ -1.09
SYNE2-215ENST00000554997 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 A0A1W2PPI3 338 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 M0R1X1 148 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 PGLYRP1O75594 196 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 CTSDP07339 412 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 FAM106CPP0CH98 169 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 PAX6P26367 422 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 CD1BP29016 333 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 SLC6A1P30531 599 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 DUTP33316 252 aaKnown RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 IER3P46695 156 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 RAB13P51153 203 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 DEFA1P59665 94 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 DEFA3P59666 94 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 RBMS3Q6XE24 437 aaKnown RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 ZNF66Q6ZN08 573 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 MOB3BQ86TA1 216 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 CFHR4Q92496 578 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 C5orf30Q96GV9 206 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 ADTRPQ96IZ2 230 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 ZNF48Q96MX3 618 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 HSD17B10Q99714 261 aaKnown RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 SSX3Q99909 188 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 NABP2Q9BQ15 211 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-215ENST00000554997 FXYD6Q9H0Q3 95 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 PALMDQ9NP74 551 aa8.21□□□□□ -1.1
SYNE2-215ENST00000554997 NF1P21359 2839 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 MDFIC2A0A1B0GVS7 189 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 TIMM23O14925 209 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 NDUFB6O95139 128 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 PGAM2P15259 253 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 S100GP29377 79 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 BTCP35070 178 aa8.2□□□□□ -1.1
SYNE2-215ENST00000554997 THBS3P49746 956 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms