RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 POMT1Q9Y6A1 747 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 SPTBN2O15020 2390 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 SLC31A2O15432 143 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 GZMHP20718 246 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 UBA52P62987 128 aaKnown RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 CMTM1Q8IZ96 169 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 BOLLQ8N9W6 283 aaKnown RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 LSM10Q969L4 123 aaKnown RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 CCL13Q99616 98 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 IFI27L2Q9H2X8 130 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 SAP30LQ9HAJ7 183 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 TMEM106BQ9NUM4 274 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 CTSZQ9UBR2 303 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 A0A1B0GV90 55 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 A0A1W2PPR1 153 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 DLX6P56179 175 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 DEFA6Q01524 100 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 ID3Q02535 119 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 SCARB1Q8WTV0 552 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 CA5BP1Q8WTZ4 195 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 ARL11Q969Q4 196 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 NARS2Q96I59 477 aaKnown RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 OR2D2Q9H210 308 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 BARX1Q9HBU1 254 aaPredicted RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 KCNJ16Q9NPI9 418 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 CALYQ9NYX4 217 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 CADP27708 2225 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 KIAA2026Q5HYC2 2103 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 KBTBD11-OT1A0A1B0GTJ5 212 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 UBE2CO00762 179 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 IFNA21P01568 189 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 OR8U9P0C7N5 309 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 SPP1P10451 314 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 PVALBP20472 110 aaPredicted RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 VDAC1P21796 283 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 SSX2Q16385 188 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 OR2B11Q5JQS5 317 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 LYPD2Q6UXB3 125 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 Q6ZRM9 215 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 SSX9Q7RTT3 188 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 OR8U1Q8NH10 309 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 DDB2Q92466 427 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 NEU1Q99519 415 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 CISD1Q9NZ45 108 aaKnown RBP7.35□□□□□ -1.23
TDP1-210ENST00000554976 CLN8Q9UBY8 286 aa7.35□□□□□ -1.23
TDP1-210ENST00000554976 IGHV3-43A0A0B4J1X8 118 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 LINC00473A8K010 186 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 ADAM20O43506 726 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 PET100P0DJ07 73 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 IGHV3-43DP0DP04 118 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 GNLYP22749 145 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 EDDM3AQ14507 147 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 MEX3BQ6ZN04 569 aaKnown RBP7.34□□□□□ -1.23
TDP1-210ENST00000554976 PPP1R35Q8TAP8 253 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 GPR146Q96CH1 333 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 PHYHIPLQ96FC7 376 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
TDP1-210ENST00000554976 ARV1Q9H2C2 271 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 MS4A5Q9H3V2 200 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 UBE2J1Q9Y385 318 aaPredicted RBP7.34□□□□□ -1.23
TDP1-210ENST00000554976 RAMP3O60896 148 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 ATG12O94817 140 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 IL2RGP31785 369 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 PAX9P55771 341 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 MIDNQ504T8 468 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 AVPI1Q5T686 147 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 ZNF596Q8TC21 504 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 LIN7CQ9NUP9 197 aaKnown RBP7.34□□□□□ -1.23
TDP1-210ENST00000554976 GFOD1Q9NXC2 390 aa7.34□□□□□ -1.23
TDP1-210ENST00000554976 DCHS2Q6V1P9 2916 aa7.34□□□□□ -1.24
TDP1-210ENST00000554976 PPIAL4EA0A075B759 164 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 LRRC30A6NM36 301 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 PPIAL4DF5H284 164 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 SPINT2O43291 252 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 MMP23AO75900 390 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 CLDN14O95500 239 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 DANCRP0C864 163 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 PPIAL4FP0DN26 164 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 P2RY1P47900 373 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 DEFA5Q01523 94 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 RBMS3Q6XE24 437 aaKnown RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 ZNF66Q6ZN08 573 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 ZNF695Q8IW36 515 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 PFDN5Q99471 154 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 EGLN1Q9GZT9 426 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 OR2S2Q9NQN1 319 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 GSKIPQ9P0R6 139 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 PPIAL4AQ9Y536 164 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 TRAV38-1A0A0B4J264 116 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 A0A1B0GU03 582 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 C19orf84I3L1E1 186 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 TMEM50AO95807 157 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 TMEM30BQ3MIR4 351 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 AARDQ4LEZ3 155 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 DHRS7BQ6IAN0 325 aaPredicted RBP7.33□□□□□ -1.24
TDP1-210ENST00000554976 ZNF841Q6ZN19 808 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 DTX2Q86UW9 622 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 MUC15Q8N387 334 aa7.33□□□□□ -1.24
TDP1-210ENST00000554976 OR10A7Q8NGE5 316 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms