RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 NAT6Q93015 286 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 UHRF2Q96PU4 802 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 TAAR3PQ9P1P4 343 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 NPIPA2E9PIF3 369 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 F2Z2F3 143 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 GNRHRP30968 328 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 SLC25A45Q8N413 288 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 PP6455Q8WZ26 134 aa13.31□□□□□ -0.28
SYNE3-203ENST00000554873 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 TMPRSS2O15393 492 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 TLX3O43711 291 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 MSR1P21757 451 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 NIT1Q86X76 327 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 ABHD3Q8WU67 409 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 GATAD1Q8WUU5 269 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 OR5P3Q8WZ94 311 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 WDR61Q9GZS3 305 aaKnown RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 WDR87Q6ZQQ6 2873 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 LOC102725191A0A1B0GVB3 256 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 DPRXA6NFQ7 191 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 ZNF891A8MT65 544 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 TOX4O94842 621 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 IGKV1D-33P01593 117 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 IGKV1-33P01594 117 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 MRPL49Q13405 166 aaKnown RBP13.3□□□□□ -0.28
SYNE3-203ENST00000554873 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 MUC15Q8N387 334 aa13.3□□□□□ -0.28
SYNE3-203ENST00000554873 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 ZFAND5O76080 213 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 WDR74Q6RFH5 385 aaPredicted RBP13.29□□□□□ -0.28
SYNE3-203ENST00000554873 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 ANGPTL7O43827 346 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 NPPCP23582 126 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 HBG1P69891 147 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 HBG2P69892 147 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 ARL16Q0P5N6 197 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 RAET1LQ5VY80 246 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 SFRP2Q96HF1 295 aa13.29□□□□□ -0.28
SYNE3-203ENST00000554873 SHANK1Q9Y566 2161 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-203ENST00000554873 HMGB3O15347 200 aaKnown RBP13.28□□□□□ -0.28
SYNE3-203ENST00000554873 C1QTNF9P0C862 333 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 AMTP48728 403 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 PRRX1P54821 245 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
SYNE3-203ENST00000554873 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 OR4F17Q8NGA8 305 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 TRAV9-1A0A075B6T8 112 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 PAGE4O60829 102 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 CTXN2P0C2S0 81 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 RIPPLY3P57055 190 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 SMIM21Q3B7S5 101 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 ASCL4Q6XD76 172 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 NABP1Q96AH0 204 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 OR6C1Q96RD1 312 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 LRFN3Q9BTN0 628 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 SLC25A22Q9H936 323 aa13.28□□□□□ -0.28
SYNE3-203ENST00000554873 MDFIC2A0A1B0GVS7 189 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 REG1AP05451 166 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.28
SYNE3-203ENST00000554873 ARG2P78540 354 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 RAB30Q15771 203 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 Q6ZSR3 168 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 TAF15Q92804 592 aaKnown RBP eCLIP13.27□□□□□ -0.28
SYNE3-203ENST00000554873 GMPPAQ96IJ6 420 aaPredicted RBP13.27□□□□□ -0.28
SYNE3-203ENST00000554873 CLUHP3Q96NS8 147 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 WNT10AQ9GZT5 417 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 CFAP54Q96N23 3096 aa13.27□□□□□ -0.28
SYNE3-203ENST00000554873 SAA2-SAA4A0A096LPE2 208 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 IGHV3-15A0A0B4J1V0 119 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 M0R135 149 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 CORTO00230 105 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 SPRY1O43609 319 aaPredicted RBP13.27□□□□□ -0.29
SYNE3-203ENST00000554873 KITLGP21583 273 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
SYNE3-203ENST00000554873 C3orf79P0CE67 100 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 ARR3P36575 388 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 OR8B8Q15620 311 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 C10orf128Q5T292 105 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 BRICD5Q6PL45 260 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 TMEM54Q969K7 222 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 SPACA9Q96E40 222 aaPredicted RBP13.26□□□□□ -0.29
SYNE3-203ENST00000554873 ADAMTS20P59510 1910 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 DKK1O94907 266 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 RPS18P62269 152 aaKnown RBP13.26□□□□□ -0.29
SYNE3-203ENST00000554873 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 HLA-DRB5Q30154 266 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 VWA1Q6PCB0 445 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 ERASQ7Z444 233 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 HAPLN4Q86UW8 402 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 OR52L2PQ8NGH6 319 aa13.26□□□□□ -0.29
SYNE3-203ENST00000554873 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms