RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 M0R1X1 148 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 TXNL1O43396 289 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 SFT2D2O95562 160 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 IFNA2P01563 188 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 IGLV2-14P01704 120 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 F2RP25116 425 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 HTR1DP28221 377 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 KIR2DS2P43631 304 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 THBS3P49746 956 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 SRPXP78539 464 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 DHRS2Q13268 280 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 UTF1Q5T230 341 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 MINOS1Q5TGZ0 78 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 ZNF833PQ6ZTB9 187 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 TEX29Q8N6K0 151 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 COQ8AQ8NI60 647 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 CD300LFQ8TDQ1 290 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 LHX4Q969G2 390 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 FAM212BQ9NTI7 297 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-206ENST00000554685 PRELID3BQ9Y3B1 194 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 TBL2Q9Y4P3 447 aaKnown RBP11.7□□□□□ -0.54
SHOX2-206ENST00000554685 ALG5Q9Y673 324 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 MINOS1-NBL1R4GNA1 71 aa11.7□□□□□ -0.54
SHOX2-206ENST00000554685 C3orf85A0A1B0GTC6 90 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 H0Y980 276 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 TNFSF12O43508 249 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 DUS4LO95620 317 aaKnown RBP11.69□□□□□ -0.54
SHOX2-206ENST00000554685 EPHA1P21709 976 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 TAGLNQ01995 201 aaKnown RBP11.69□□□□□ -0.54
SHOX2-206ENST00000554685 CBX3Q13185 183 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 KLRD1Q13241 179 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 MIDNQ504T8 468 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 RPL39P5Q59GN2 51 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 TCTEX1D2Q8WW35 142 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 RPEQ96AT9 228 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 PHB2Q99623 299 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 SEC22CQ9BRL7 303 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 OR51J1Q9H342 316 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
SHOX2-206ENST00000554685 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 A0A0B4J293 547 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 A0A0B4J2A0 478 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
SHOX2-206ENST00000554685 ZNF16P17020 682 aaPredicted RBP11.68□□□□□ -0.54
SHOX2-206ENST00000554685 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
SHOX2-206ENST00000554685 DLX1P56177 255 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 EIF4EBP1Q13541 118 aaPredicted RBP11.68□□□□□ -0.54
SHOX2-206ENST00000554685 GPR157Q5UAW9 335 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 CCDC144NLQ6NUI1 221 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 TGIF2LXQ8IUE1 241 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 CASTOR1Q8WTX7 329 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 ZNF251Q9BRH9 671 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 SHPKQ9UHJ6 478 aa11.68□□□□□ -0.54
SHOX2-206ENST00000554685 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
SHOX2-206ENST00000554685 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
SHOX2-206ENST00000554685 PDZD2O15018 2839 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
SHOX2-206ENST00000554685 SSNA1O43805 119 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 APOA2P02652 100 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 SERPINE2P07093 398 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 RRASP10301 218 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 RPA2P15927 270 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 BPIFB3P59826 476 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
SHOX2-206ENST00000554685 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
SHOX2-206ENST00000554685 SLC9A3R2Q15599 337 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 LGI3Q8N145 548 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 OR8H3Q8N146 312 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 C12orf45Q8N5I9 185 aaPredicted RBP11.67□□□□□ -0.54
SHOX2-206ENST00000554685 OR52B4Q8NGK2 314 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 C5orf30Q96GV9 206 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 TMEM222Q9H0R3 208 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
SHOX2-206ENST00000554685 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 NPFFO15130 113 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 RBFOX2O43251 390 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHOX2-206ENST00000554685 PROP1O75360 226 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 ATG12O94817 140 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
SHOX2-206ENST00000554685 UCP1P25874 307 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms