RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NDUFB4O95168 129 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PCP4P48539 62 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
VTI1B-204ENST00000554659 FOXC1Q12948 553 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 PCGF1Q9BSM1 259 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 TNFRSF19Q9NS68 423 aa12.06□□□□□ -0.48
VTI1B-204ENST00000554659 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
VTI1B-204ENST00000554659 KLK2P20151 261 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 HOXA4Q00056 320 aaPredicted RBP12.05□□□□□ -0.48
VTI1B-204ENST00000554659 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
VTI1B-204ENST00000554659 SELENOHQ8IZQ5 122 aaKnown RBP12.05□□□□□ -0.48
VTI1B-204ENST00000554659 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
VTI1B-204ENST00000554659 DANCRP0C864 163 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 Q5BKY6 102 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 SMOC1Q9H4F8 434 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 B4E171 279 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 SOD3P08294 240 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
VTI1B-204ENST00000554659 TSPAN7P41732 249 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 HEXA-AS1Q9H8Q6 139 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 A8MWL6 223 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 TAS2R60P59551 318 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 CFHR5Q9BXR6 569 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 RBKSQ9H477 322 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 RABAC1Q9UI14 185 aa12.05□□□□□ -0.48
VTI1B-204ENST00000554659 C19orf48Q6RUI8 117 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 UQCR10Q9UDW1 63 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 IGHV3OR15-7A0A075B7D8 119 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 TMEM14DPA8MWL7 114 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 KLF4O43474 513 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 CLDN14O95500 239 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 OR2H2O95918 312 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 TWIST1Q15672 202 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 Q96M66 194 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 PKIBQ9C010 78 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 HIGD1AQ9Y241 93 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 F2RL2O00254 374 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 LRRC75BQ2VPJ9 315 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 GCSAMQ8N6F7 178 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 POC1AQ8NBT0 407 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 GPR146Q96CH1 333 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 H0YL77 283 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 TFF2Q03403 129 aa12.04□□□□□ -0.48
VTI1B-204ENST00000554659 NPIPB13A6NJU9 1138 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 NPIPB4C9JG80 1138 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 K7N7A8 449 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 IL9P15248 144 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 RND3P61587 244 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 IGLV3-21P80748 117 aaPredicted RBP12.03□□□□□ -0.48
VTI1B-204ENST00000554659 HYPMO75409 117 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 UCP3P55916 312 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 PMCHL1Q16048 86 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 WNT2BQ93097 391 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 LTBP4Q8N2S1 1624 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 TRBV23-1A0A0A0MS06 115 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
VTI1B-204ENST00000554659 APCDD1LQ8NCL9 501 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 OR52M1Q8NGK5 317 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 FAM216AQ8WUB2 273 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 UCP2P55851 309 aa12.03□□□□□ -0.48
VTI1B-204ENST00000554659 SLC25A10Q9UBX3 287 aaPredicted RBP12.03□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 HLA-DQA1P01909 254 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 ZNF735P0CB33 412 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 SELENOTP62341 195 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 IBA57Q5T440 356 aaKnown RBP12.02□□□□□ -0.48
VTI1B-204ENST00000554659 FAM117AQ9C073 453 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 KBTBD11O94819 623 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 LEPROTL1O95214 131 aa12.02□□□□□ -0.48
VTI1B-204ENST00000554659 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.48
VTI1B-204ENST00000554659 RPL31P62899 125 aaKnown RBP12.02□□□□□ -0.48
VTI1B-204ENST00000554659 SCN4AP35499 1836 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM187Q14656 261 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 TTC32Q5I0X7 151 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 FGFRL1Q8N441 504 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 IL36RNQ9UBH0 155 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 R4GN57 208 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 A0A1W2PPE3 182 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 EMP1P54849 157 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 WDR25Q64LD2 544 aaPredicted RBP12.02□□□□□ -0.49
VTI1B-204ENST00000554659 PQLC2Q6ZP29 291 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 RND1Q92730 232 aa12.02□□□□□ -0.49
VTI1B-204ENST00000554659 SHISA3A0PJX4 238 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 MAS1LP35410 378 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 LSM10Q969L4 123 aaKnown RBP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 MRPL13Q9BYD1 178 aaKnown RBP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms