RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RNASEH2CQ8TDP1 164 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 CA5BP1Q8WTZ4 195 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 PIGTQ969N2 578 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ERGIC1Q969X5 290 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 NOL4LQ96MY1 436 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 AGMATQ9BSE5 352 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF700Q9H0M5 742 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 C11orf1Q9H5F2 150 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 CHODLQ9H9P2 273 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 PLEK2Q9NYT0 353 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 MCTS1Q9ULC4 181 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF835Q9Y2P0 537 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 RCL1Q9Y2P8 373 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 UBE2J1Q9Y385 318 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TIMM9Q9Y5J7 89 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 KIAA1549Q9HCM3 1950 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 SVILO95425 2214 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 CACNA1CQ13936 2221 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TRBV6-6A0A0A6YYG2 114 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 hCG_1809904A0A1W2PP81 198 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1W2PR64 198 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1W2PRV1 198 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR5H15A6NDH6 313 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR2W5A6NFC9 320 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR5H1A6NKK0 313 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 FAM90A26D6RGX4 464 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 NPIPB11E5RHQ5 1161 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 DVL1O14640 695 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 HSD17B6O14756 317 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 GEMIN2O14893 280 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 HMGB3O15347 200 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 TXNL1O43396 289 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 KCNAB3O43448 404 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 NRASP01111 189 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 PPYP01298 95 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 MBP02144 154 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 COX6A1P12074 109 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 KLK2P20151 261 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 FGF7P21781 194 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 ATP6V0CP27449 155 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 APLNRP35414 380 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 CEACAM6P40199 344 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 HAAOP46952 286 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 CLDN17P56750 224 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 RBM11P57052 281 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 LOXL3P58215 753 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR2B8PP59922 312 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 ENDOGQ14249 297 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 RNPS1Q15287 305 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 ELOBQ15370 118 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF674Q2M3X9 581 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 AKIRIN2Q53H80 203 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 SHISA6Q6ZSJ9 500 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 MOB1BQ7L9L4 216 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 C6orf201Q7Z4U5 140 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 LYZL2Q7Z4W2 148 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 CPEB2Q7Z5Q1 589 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 C20orf196Q8IYI0 205 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM123Q8N131 208 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM252Q8N6L7 170 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 HSD17B11Q8NBQ5 300 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 BHLHE23Q8NDY6 225 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR1F12Q8NHA8 337 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 OR2V1Q8NHB1 315 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 CLDND2Q8NHS1 167 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 SCGB1C1Q8TD33 95 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 MBD3L1Q8WWY6 194 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 PSMF1Q92530 271 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 LSM10Q969L4 123 aaKnown RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 TOMM40LQ969M1 308 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 SLAMF9Q96A28 289 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 NABP1Q96AH0 204 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 ACY3Q96HD9 319 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 REEP6Q96HR9 211 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 LYZL4Q96KX0 146 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 SPACA5Q96QH8 159 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 NKX3-1Q99801 234 aaPredicted RBP5□□□□□ -1.61
VPS33B-203ENST00000554264 FOXC2Q99958 501 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 KLHDC3Q9BQ90 382 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 EMC6Q9BV81 110 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 DEFB126Q9BYW3 111 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 SMIM3Q9BZL3 60 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 ULBP2Q9BZM5 246 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 CXXC4Q9H2H0 198 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 DOK5Q9P104 306 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 FBXO7Q9Y3I1 522 aa5□□□□□ -1.61
VPS33B-203ENST00000554264 PUS1Q9Y606 427 aaKnown RBP eCLIP5□□□□□ -1.61
VPS33B-203ENST00000554264 NAV3Q8IVL0 2385 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 LOC102723996A0A087X1L8 192 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 IGHV1-45A0A0A0MS14 117 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 LOC102723971A0A1B0GUV8 181 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1W2PPE2 198 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 SMCO3A2RU48 225 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 LINC00473A8K010 186 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 RNF212BA8MTL3 300 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF724A8MTY0 619 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 PPP5D1E7EU14 171 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 F5H5K5 113 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM250H0YL14 139 aa4.99□□□□□ -1.61
VPS33B-203ENST00000554264 DEGS1O15121 323 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms