RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GGT2P36268 569 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 NSG1P42857 185 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 GPR1P46091 355 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RAB25P57735 213 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RHOAP61586 193 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 COPZ1P61923 177 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 GNGT1P63211 74 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 PSG4Q00888 419 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 PRKCDQ05655 676 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 INCA1Q0VD86 236 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 FAM53BQ14153 422 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RSU1Q15404 277 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SPA17Q15506 151 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TSNQ15631 228 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 TAL2Q16559 108 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 C4orf26Q17RF5 130 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 LRRC26Q2I0M4 334 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 LRRC75BQ2VPJ9 315 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CCSMST1Q4G0I0 132 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 HSD17B12Q53GQ0 312 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 PYY3Q5JQD4 70 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SOHLH1Q5JUK2 328 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 NCMAPQ5T1S8 102 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TMEM78Q5T7P6 136 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 FAM78BQ5VT40 261 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DNAJC24Q6P3W2 148 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 XKRXQ6PP77 449 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TEX261Q6UWH6 196 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 LINC00299Q6ZSB3 139 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MBOAT2Q6ZWT7 520 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SSX6Q7RTT6 188 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DEFB128Q7Z7B8 93 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 COMMD7Q86VX2 200 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DOLPP1Q86YN1 238 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CTAGE3PQ8IX95 158 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DAW1Q8N136 415 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SLC35F6Q8N357 371 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MS4A15Q8N5U1 240 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 ACBD7Q8N6N7 88 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 OR6K2Q8NGY2 324 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 OR5J2Q8NH18 312 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 OR4C6Q8NH72 309 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CIRBP-AS1Q8TBR5 109 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 ZFAND1Q8TCF1 268 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SPPL2BQ8TCT7 592 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TNFAIP8L1Q8WVP5 186 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 HIST1H2BAQ96A08 127 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CLDN23Q96B33 292 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 GALMQ96C23 342 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MRAP2Q96G30 205 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SMIM8Q96KF7 97 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DNAJC30Q96LL9 226 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 OR7D2Q96RA2 312 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TBX5Q99593 518 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TIMM17AQ99595 171 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CDX2Q99626 313 aaPredicted RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 C20orf144Q9BQM9 153 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MARVELD1Q9BSK0 173 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CCDC32Q9BV29 185 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 NUDT9Q9BW91 350 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 REG4Q9BYZ8 158 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 ACTR3CQ9C0K3 210 aaPredicted RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 OR52D1Q9H346 318 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DSN1Q9H410 356 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 FAM96AQ9H5X1 160 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CWH43Q9H720 699 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CACYBPQ9HB71 228 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 RDH14Q9HBH5 336 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 CLN6Q9NWW5 311 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RSL24D1Q9UHA3 163 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 LGALS13Q9UHV8 139 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 GNG8Q9UK08 70 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SNX12Q9UMY4 172 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SSR3Q9UNL2 185 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 BAIAP2Q9UQB8 552 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 TP53TG1Q9Y2A0 90 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RCL1Q9Y2P8 373 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 RBM7Q9Y580 266 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 ZCCHC11Q5TAX3 1644 aaKnown RBP1.46□□□□□ -2.18
VRK1-202ENST00000553683 OVOS2A0A0J9YW53 1432 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MYOM3Q5VTT5 1437 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 OVOS2Q6IE36 1432 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SPATA31E1Q6ZUB1 1445 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 DIP2AQ14689 1571 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 RGPD1P0DJD0 1748 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 PALLDQ8WX93 1383 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 MYO18BQ8IUG5 2567 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 ZNF407Q9C0G0 2248 aa1.46□□□□□ -2.18
VRK1-202ENST00000553683 SLIT2O94813 1529 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ABCC2Q92887 1545 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 C3P01024 1663 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 TTC28Q96AY4 2481 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 HECTD1Q9ULT8 2610 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 GRIN2BQ13224 1484 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 LRRC9Q6ZRR7 1453 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 NLRP1Q9C000 1473 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 ARHGAP35Q9NRY4 1499 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 MBD5Q9P267 1494 aa1.45□□□□□ -2.18
VRK1-202ENST00000553683 SPTBN4Q9H254 2564 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms