RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 SERTAD4Q9NUC0 356 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 NXT1Q9UKK6 140 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 HHLA2Q9UM44 414 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 VDAC3Q9Y277 283 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 LSM5Q9Y4Y9 91 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 KIAA1549Q9HCM3 1950 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 A0A0G2JK05 382 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FTCDNL1E5RQL4 147 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ATP1B1P05026 303 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 IGHV4-34P06331 123 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TCN2P20062 427 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 PPOXP50336 477 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TPPP2P59282 170 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 SNRPGP62308 76 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 RHOGP84095 191 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 HIST1H1AQ02539 215 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 SPATA31B1PQ5VZV4 182 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 WDR25Q64LD2 544 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 PARM1Q6UWI2 310 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FBXW12Q6X9E4 464 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 COMMD6Q7Z4G1 85 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 CEACAM19Q7Z692 300 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 OR2L13Q8N349 312 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ZNF433Q8N7K0 673 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 CMTM2Q8TAZ6 248 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 RPS4Y2Q8TD47 263 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 MS4A6EQ96DS6 147 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 OR10C1Q96KK4 312 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TNFRSF13CQ96RJ3 184 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ULBP2Q9BZM5 246 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 OR52D1Q9H346 318 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 MRPL16Q9NX20 251 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 JPT1Q9UK76 154 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FANCMQ8IYD8 2048 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 USP34Q70CQ2 3546 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 IGHV1-69-2A0A0G2JMI3 117 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 MEIS3P1A6NDR6 274 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 LILRA5A6NI73 299 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SLC22A20A6NK97 555 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 J3QRE1 110 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 LAMTOR5O43504 91 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 LYPD3O95274 346 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 HLA-AP01891 365 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 CRYGBP07316 175 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PTHLHP12272 177 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 CFPP27918 469 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PSG9Q00887 426 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PLCXD2Q0VAA5 305 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KLF5Q13887 457 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 PRTGQ2VWP7 1150 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 MORN2Q502X0 79 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 C12orf73Q69YU5 71 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 MBOAT2Q6ZWT7 520 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SYT12Q8IV01 421 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ZNF101Q8IZC7 436 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TMEM178AQ8NBL3 297 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR6T1Q8NGN1 323 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR10S1Q8NGN2 331 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PTH2Q96A98 100 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SLAMF6Q96DU3 332 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ZC2HC1AQ96GY0 325 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR2A5Q96R48 311 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SLC17A9Q9BYT1 436 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 NMNAT2Q9BZQ4 307 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PARLQ9H300 379 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 APMAPQ9HDC9 416 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PARP11Q9NR21 331 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 INPP5EQ9NRR6 644 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 MED29Q9NX70 200 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KCNIP1Q9NZI2 227 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR1A1Q9P1Q5 309 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ALPK2Q86TB3 2170 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 CDH23Q9H251 3354 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KIR2DS5A0A0G2JLQ3 304 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 A0A0G2JMM0 328 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 A0A0G2JNG1 304 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TMEM272A0A1B0GTI8 110 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 A0A1W2PPB8 328 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR6C6A6NF89 314 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KIR3DP1A8MWS1 328 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 DIRC3C9JPN6 131 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KIR2DS3K7RE56 304 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 HMGB3O15347 200 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 GPR137BO60478 399 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 EPPINO95925 133 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FAM157CP0CG43 387 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SLC25A4P12235 298 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ELAVL4P26378 380 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 CDKN1AP38936 164 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 GLIPR1P48060 266 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 RPS15AP62244 130 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 KIR2DS5Q14953 304 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TNXAQ16473 311 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ACOT6Q3I5F7 207 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 FAM27D1Q5T7N8 215 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FAM78BQ5VT40 261 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 RPL7L1Q6DKI1 246 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 LEG1Q6P5S2 330 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ZNF485Q8NCK3 441 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms