RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 FAM71F2Q6NXP2 309 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 UNQ5815/PRO19632Q6UWF5 114 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 FAM131AQ6UXB0 335 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 C5orf24Q7Z6I8 188 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SATL1Q86VE3 508 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 PPP1R27Q86WC6 154 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SYS1Q8N2H4 156 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 Q8N402 240 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 LFNGQ8NES3 379 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 OR52L2PQ8NGH6 319 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 NEK7Q8TDX7 302 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 TSEN15Q8WW01 171 aaKnown RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 DDB2Q92466 427 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 MS4A10Q96PG2 267 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 MLST8Q9BVC4 326 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 METTL9Q9H1A3 318 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 WFDC10AQ9H1F0 79 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 IFI27L2Q9H2X8 130 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 TUBA4BQ9H853 241 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ISG20L2Q9H9L3 353 aaKnown RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 RAB9BQ9NP90 201 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 SIGLEC8Q9NYZ4 499 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 ENOPH1Q9UHY7 261 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 JPT1Q9UK76 154 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 POMPQ9Y244 141 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 EXOGQ9Y2C4 368 aaKnown RBP5.49□□□□□ -1.53
ATXN3-219ENST00000553488 GMPPBQ9Y5P6 360 aa5.49□□□□□ -1.53
ATXN3-219ENST00000553488 G3V2T6 193 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 J3KRW8 73 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
ATXN3-219ENST00000553488 LY6G6CO95867 125 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TRBV12-3P01733 135 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TRGV3P03979 118 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TFAP2AP05549 437 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 SYNJ2BPP57105 145 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 LY6G6FQ5SQ64 297 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 SLC25A30Q5SVS4 291 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TRAT1Q6PIZ9 186 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 RPP25LQ8N5L8 163 aaKnown RBP5.48□□□□□ -1.53
ATXN3-219ENST00000553488 ACBD7Q8N6N7 88 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 OR5AK2Q8NH90 309 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 MRPL30Q8TCC3 161 aaKnown RBP5.48□□□□□ -1.53
ATXN3-219ENST00000553488 LGALS12Q96DT0 336 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 RDH12Q96NR8 316 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 NEU1Q99519 415 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 ALG8Q9BVK2 526 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TAF9BQ9HBM6 251 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 SPACA1Q9HBV2 294 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 RANGRFQ9HD47 186 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-219ENST00000553488 OR2S2Q9NQN1 319 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 ETAA1Q9NY74 926 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 TRAPPC2LQ9UL33 140 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 ERGIC3Q9Y282 383 aa5.48□□□□□ -1.53
ATXN3-219ENST00000553488 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 OR5H14A6NHG9 310 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 H0YJW9 148 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 H3BUA1 57 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 MAGEB3O15480 346 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 SLC25A17O43808 307 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 YPEL1O60688 119 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF780AO75290 641 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 FADS2O95864 444 aaKnown RBP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CA2P00918 260 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 RPSAP08865 295 aaKnown RBP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CD7P09564 240 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CT45A6P0DMU7 189 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CT45A5P0DMU8 189 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CT45A7P0DMV0 189 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 GTF2F2P13984 249 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF93P35789 620 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 SOX2P48431 317 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 CD81P60033 236 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 GNGT1P63211 74 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 HTD2P86397 168 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 DEFA5Q01523 94 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 EWSR1Q01844 656 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 TMEM267Q0VDI3 215 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-219ENST00000553488 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 MOGAT2Q3SYC2 334 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 SLC22A6Q4U2R8 563 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 C6orf141Q5SZD1 244 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 DDI2Q5TDH0 399 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 XAF1Q6GPH4 301 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 SIGIRRQ6IA17 410 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 RAB12Q6IQ22 244 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF562Q6V9R5 426 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ZNF554Q86TJ5 538 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 LHFPL3Q86UP9 236 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 LAX1Q8IWV1 398 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 STX19Q8N4C7 294 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 DEFB125Q8N687 156 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 POC5Q8NA72 575 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 OR2K2Q8NGT1 345 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ABHD5Q8WTS1 349 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 ORAI1Q96D31 301 aa5.47□□□□□ -1.53
ATXN3-219ENST00000553488 YPEL2Q96QA6 119 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms