RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 OR1L1Q8NH94 360 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 FOXB1Q99853 325 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 F2Z2F3 143 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 SYNGR1O43759 233 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 WDR1O75083 606 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 CELA2AP08217 269 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 COMPP49747 757 aaPredicted RBP9.6□□□□□ -0.87
NRDE2-202ENST00000553409 LHX2P50458 406 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
NRDE2-202ENST00000553409 MMDQ15546 238 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 CEACAM16Q2WEN9 425 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 SFRP2Q96HF1 295 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 FOXJ2Q9P0K8 574 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 RNF114Q9Y508 228 aa9.6□□□□□ -0.87
NRDE2-202ENST00000553409 RBM7Q9Y580 266 aaKnown RBP9.6□□□□□ -0.87
NRDE2-202ENST00000553409 EPOPA6NHQ4 379 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TMPRSS2O15393 492 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CHRNB4P30926 498 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 RANP62826 216 aaKnown RBP9.59□□□□□ -0.87
NRDE2-202ENST00000553409 OR5AU1Q8NGC0 362 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 MSL2Q9HCI7 577 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CLN8Q9UBY8 286 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 KCNS2Q9ULS6 477 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TRAPPC2LH3BP13 241 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 HNF1AP20823 631 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 SELENOTP62341 195 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 HYAL1Q12794 435 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 MSMO1Q15800 293 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CPEB3Q8NE35 698 aaKnown RBP9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CPT1CQ8TCG5 803 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 PSMF1Q92530 271 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 SPSB4Q96A44 273 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 BTF3L4Q96K17 158 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 OR6C1Q96RD1 312 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TMEM147Q9BVK8 224 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TRAV24A0A0B4J272 114 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CCL3P10147 92 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CRISP2P16562 243 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 CCNOP22674 350 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 SLC23A3Q6PIS1 610 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 TMPRSS7Q7RTY8 843 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 MKXQ8IYA7 352 aa9.59□□□□□ -0.87
NRDE2-202ENST00000553409 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 SLC35E1Q96K37 410 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 CIB3Q96Q77 187 aaPredicted RBP9.58□□□□□ -0.88
NRDE2-202ENST00000553409 PCED1AQ9H1Q7 454 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 AKIRIN1Q9H9L7 192 aaPredicted RBP9.58□□□□□ -0.88
NRDE2-202ENST00000553409 PMS2P5A8MQ11 134 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 CCL2P13500 99 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 THBS3P49746 956 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 WDR74Q6RFH5 385 aaPredicted RBP9.58□□□□□ -0.88
NRDE2-202ENST00000553409 STPG4Q8N801 248 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
NRDE2-202ENST00000553409 C1QTNF5Q9BXJ0 243 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 SAMD10Q9BYL1 202 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 PRUNE2Q8WUY3 3088 aa9.58□□□□□ -0.88
NRDE2-202ENST00000553409 IGHV1OR15-9A0A0B4J2B8 117 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 CBR3O75828 277 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 LIFP15018 202 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 CDC34P49427 236 aaPredicted RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 AAED1Q7RTV5 226 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 RABEPKQ7Z6M1 372 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 OR5A2Q8NGI9 324 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 PROK2Q9HC23 129 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 LIN7CQ9NUP9 197 aaKnown RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 TRAV38-1A0A0B4J264 116 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 MDFIC2A0A1B0GVS7 189 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 LNP1A1A4G5 178 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 PDE6DO43924 150 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 NDUFB8O95169 186 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 IGHV3-9P01782 118 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 ESDP10768 282 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 KITLGP21583 273 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 CD27P26842 260 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 BAGE3Q86Y29 109 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 SAXO1Q8IYX7 474 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 TMEM204Q9BSN7 226 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 MTIF3Q9H2K0 278 aaKnown RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 FBXL7Q9UJT9 491 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 USF3Q68DE3 2245 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 FAM90A26D6RGX4 464 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 KRASP01116 189 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 DSCR4P56555 118 aaPredicted RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 RAC1P63000 192 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 FAM103A1Q9BTL3 118 aaKnown RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 MRPL18Q9H0U6 180 aaKnown RBP9.57□□□□□ -0.88
NRDE2-202ENST00000553409 CLEC1BQ9P126 229 aa9.57□□□□□ -0.88
NRDE2-202ENST00000553409 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
NRDE2-202ENST00000553409 F6UZH7 168 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms