RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 RFX2P48378 723 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 RPL15P61313 204 aaKnown RBP9.19□□□□□ -0.94
TMEM116-218ENST00000552839 CBX3Q13185 183 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 HERPUD1Q15011 391 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 SSX2Q16385 188 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 STEAP1BQ6NZ63 245 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 SLC25A48Q6ZT89 311 aaKnown RBP9.19□□□□□ -0.94
TMEM116-218ENST00000552839 TGIF2LXQ8IUE1 241 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 C8orf31Q8N9H6 132 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 OR4P4Q8NGL7 312 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 OR6F1Q8NGZ6 308 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 OR8U1Q8NH10 309 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 SECTM1Q8WVN6 248 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 CAPSLQ8WWF8 208 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 BORCS5Q969J3 196 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 TSC22D3Q99576 134 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF2Q9BSG1 426 aaPredicted RBP9.19□□□□□ -0.94
TMEM116-218ENST00000552839 SRRQ9GZT4 340 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF107Q9UII5 783 aaPredicted RBP9.19□□□□□ -0.94
TMEM116-218ENST00000552839 ANAPC10Q9UM13 185 aa9.19□□□□□ -0.94
TMEM116-218ENST00000552839 IGKV1-6A0A0C4DH72 117 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 A0A0U1RQK1 487 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 LINC00854A0A1B0GVQ3 168 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 BUB1B-PAK6H3BSN5 160 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 RAB29O14966 203 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 SLC31A2O15432 143 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 TXNL1O43396 289 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 GPR137BO60478 399 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 SLC22A5O76082 557 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 NAT1P18440 290 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 BRS3P32247 399 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF79Q15937 498 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 LHFPL4Q7Z7J7 247 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 MOB3BQ86TA1 216 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 H1FOOQ8IZA3 346 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-218ENST00000552839 ARRDC1Q8N5I2 433 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 LINC00311Q8N616 119 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 SSMEM1Q8WWF3 244 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 MALSU1Q96EH3 234 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 CCDC32Q9BV29 185 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 C11orf54Q9H0W9 315 aaPredicted RBP9.18□□□□□ -0.94
TMEM116-218ENST00000552839 AKIP1Q9NQ31 210 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 SCP2D1Q9UJQ7 156 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 RNF150Q9ULK6 438 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 OR2W1Q9Y3N9 320 aa9.18□□□□□ -0.94
TMEM116-218ENST00000552839 OOSP1A8MZH6 123 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 ITGB1BP1O14713 200 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 PPYP01298 95 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 GAPDHP04406 335 aaKnown RBP9.17□□□□□ -0.94
TMEM116-218ENST00000552839 AADACP22760 399 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 REG1BP48304 166 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 PPP5CP53041 499 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 DYRK1AQ13627 763 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 HES1Q14469 280 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 C2orf68Q2NKX9 166 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 ABCA11PQ4W5N1 156 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 LY6G6FQ5SQ64 297 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 VAX1Q5SQQ9 334 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 TPTE2P1Q5T6R2 138 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 FAM53AQ6NSI3 398 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-218ENST00000552839 MFSD4AQ8N468 514 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 ABHD14BQ96IU4 210 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 PRRT1Q99946 306 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 SOSTQ9BQB4 213 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 TINAGL1Q9GZM7 467 aaPredicted RBP9.17□□□□□ -0.94
TMEM116-218ENST00000552839 SLC5A7Q9GZV3 580 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 DPAGT1Q9H3H5 408 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 GHITMQ9H3K2 345 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 ZNRD1Q9P1U0 126 aa9.17□□□□□ -0.94
TMEM116-218ENST00000552839 SAA2-SAA4A0A096LPE2 208 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 ANKRD20A5PA0PJZ0 165 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 M0R1X1 148 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 TUSC2O75896 110 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 IGLV1-47P01700 117 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 IGHV4-59P01825 116 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 APOA2P02652 100 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 IL7P13232 177 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 CD40LGP29965 261 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 LRRC75BQ2VPJ9 315 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 FAAP20Q6NZ36 180 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 Q6ZSV7 163 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 OVCH2Q7RTZ1 564 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 OR8H3Q8N146 312 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF645Q8N7E2 425 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 ZNF439Q8NDP4 499 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 OR4C16Q8NGL9 310 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
TMEM116-218ENST00000552839 C14orf166Q9Y224 244 aaKnown RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 RBMX2Q9Y388 322 aaKnown RBP9.16□□□□□ -0.94
TMEM116-218ENST00000552839 NAP1L6A6NFF2 107 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms