RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 MED10Q9BTT4 135 aa0.84□□□□□ -2.27
USP44-207ENST00000552237 SPANXB1Q9NS25 103 aaPredicted RBP0.84□□□□□ -2.27
USP44-207ENST00000552237 ZNF532Q9HCE3 1301 aa0.84□□□□□ -2.28
USP44-207ENST00000552237 SYNRGQ9UMZ2 1314 aa0.84□□□□□ -2.28
USP44-207ENST00000552237 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
USP44-207ENST00000552237 TRAV41A0A0B4J266 112 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 GOLGA8QA0A0J9YX86 632 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 UBE2L6O14933 153 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 PSMG1O95456 288 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ASS1P00966 412 aaKnown RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 CD7P09564 240 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ZNF705DP0CH99 300 aaPredicted RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 ZNF705BP0CI00 300 aaPredicted RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 LIMS3P0CW19 117 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 LIMS4P0CW20 117 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ZNF728P0DKX0 622 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 CRYBB3P26998 211 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ADORA1P30542 326 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 LCN1P31025 176 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 OPRM1P35372 400 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 TAS2R45P59539 299 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 BTN3A2P78410 334 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 FAM3AP98173 230 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 STX3Q13277 289 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 C1DQ13901 141 aaKnown RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 DNAL1Q4LDG9 190 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 PABPC1L2AQ5JQF8 200 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 RBM48Q5RL73 367 aaKnown RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 PLCZ1Q86YW0 608 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 FAM9CQ8IZT9 166 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 C17orf78Q8N4C9 275 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 CNEP1R1Q8N9A8 125 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 OR8B12Q8NGG6 310 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ZNF75CPQ92670 426 aaPredicted RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 ATP6V1G3Q96LB4 118 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 TMEM56Q96MV1 263 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 HBEGFQ99075 208 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 DRC3Q9H069 523 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 METTL9Q9H1A3 318 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 AGPAT3Q9NRZ7 376 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 ZNHIT6Q9NWK9 470 aaKnown RBP0.83□□□□□ -2.28
USP44-207ENST00000552237 CD300AQ9UGN4 299 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 GLS2Q9UI32 602 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 SNX10Q9Y5X0 201 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 MED13Q9UHV7 2174 aa0.83□□□□□ -2.28
USP44-207ENST00000552237 DAPL1A0PJW8 107 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 SMIM23A6NLE4 172 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 ZNF705FA8MVS1 300 aaPredicted RBP0.82□□□□□ -2.28
USP44-207ENST00000552237 HSBP1L1C9JCN9 74 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 F8VZ95 297 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 SLC17A3O00476 420 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 IGHV1-69P01742 117 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TPM3P06753 285 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 BPGMP07738 259 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 UCHL1P09936 223 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 CRATP43155 626 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 XCL1P47992 114 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 MAP3K7CLP57077 242 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 LINC00313P59037 77 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 RAB8AP61006 207 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TMEM258P61165 79 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TPM4P67936 248 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 GNA12Q03113 381 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TBC1D28Q2M2D7 210 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 AMTNQ6UX39 209 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 SLC51BQ86UW2 128 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TNFAIP8L1Q8WVP5 186 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 FAM210AQ96ND0 272 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 SERPINB11Q96P15 392 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 RETNLBQ9BQ08 111 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 TMEM208Q9BTX3 173 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 NSRP1Q9H0G5 558 aaKnown RBP0.82□□□□□ -2.28
USP44-207ENST00000552237 OR51B6Q9H340 312 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 FAM96AQ9H5X1 160 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 FKBP14Q9NWM8 211 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 MS4A12Q9NXJ0 267 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 POFUT2Q9Y2G5 429 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 FAM215AQ9Y5M1 114 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 LRPPRCP42704 1394 aaKnown RBP0.82□□□□□ -2.28
USP44-207ENST00000552237 KIAA0232Q92628 1395 aa0.82□□□□□ -2.28
USP44-207ENST00000552237 DSCAML1Q8TD84 2053 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 CHD2O14647 1828 aaKnown RBP0.81□□□□□ -2.28
USP44-207ENST00000552237 MEIKINA0A087WXM9 373 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 TRGV5A0A0B4J1U4 118 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 A0A1B0GW54 56 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 F5H5K5 113 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 GOLGA8RI6L899 631 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 COPEO14579 308 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 SSNA1O43805 119 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 ATP6V1G2O95670 118 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 IGLV3-27P01718 113 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 AGTR1P30556 359 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 G6PCP35575 357 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 CD79BP40259 229 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 CDK9P50750 372 aaKnown RBP0.81□□□□□ -2.28
USP44-207ENST00000552237 DAPP51397 102 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 IDH3GP51553 393 aaPredicted RBP0.81□□□□□ -2.28
USP44-207ENST00000552237 BATFQ16520 125 aa0.81□□□□□ -2.28
USP44-207ENST00000552237 OGFRL1Q5TC84 451 aaPredicted RBP0.81□□□□□ -2.28
USP44-207ENST00000552237 FAM45BPQ6NSW5 357 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms