RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 SGPP2Q8IWX5 399 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 OR5A1Q8NGJ0 315 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 SCGB1C1Q8TD33 95 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 SMIM14Q96QK8 99 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 ATOH8Q96SQ7 321 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 VCXQ9H320 206 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 PROCRQ9UNN8 238 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 SPEF2Q9C093 1822 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 NFASCO94856 1347 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 DOCK7Q96N67 2140 aa4.66□□□□□ -1.66
VPS29-210ENST00000552130 ABCC12Q96J65 1359 aa4.65□□□□□ -1.66
VPS29-210ENST00000552130 HECW2Q9P2P5 1572 aa4.65□□□□□ -1.66
VPS29-210ENST00000552130 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 MEIKINA0A087WXM9 373 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 RIIAD1A6NNX1 92 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 PMS2P5A8MQ11 134 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 K7ERU9 68 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 LGALS9O00182 355 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 ZNF253O75346 499 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 POP7O75817 140 aaKnown RBP4.65□□□□□ -1.67
VPS29-210ENST00000552130 TNFSF13O75888 250 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 CDS2O95674 445 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 GYPCP04921 128 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 TDGF1P13385 188 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 IL3RAP26951 378 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 CNTFRP26992 372 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 G6PCP35575 357 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 TDGF1P3P51864 188 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 DEFA3P59666 94 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 HTR4Q13639 388 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 ZFP69Q49AA0 526 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 CASC10Q5T4H9 136 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 MOB1BQ7L9L4 216 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 ZNF584Q8IVC4 421 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 TMEM86AQ8N2M4 240 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 ORAOV1Q8WV07 137 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 FRZBQ92765 325 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 C14orf144Q96I85 54 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 TMEM101Q96IK0 257 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 YPEL4Q96NS1 127 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 GNG8Q9UK08 70 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 NEUROG3Q9Y4Z2 214 aa4.65□□□□□ -1.67
VPS29-210ENST00000552130 OVOS2A0A0J9YW53 1432 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 OVOS2Q6IE36 1432 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 TRAV19A0A0A6YYK7 116 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 IGHV3-35A0A0C4DH35 117 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 H3BSA7 217 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 PIRO00625 290 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 SRSF10O75494 262 aaKnown RBP4.64□□□□□ -1.67
VPS29-210ENST00000552130 BANF1O75531 89 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 SUPT7LO94864 414 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 FAM107AO95990 144 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 S100A8P05109 93 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 TSPAN19P0C672 248 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 THBS3P49746 956 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 TAF6P49848 677 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 POLR2HP52434 150 aaKnown RBP4.64□□□□□ -1.67
VPS29-210ENST00000552130 WNT4P56705 351 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 GNG2P59768 71 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 CXCL6P80162 114 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 SCGB2B2Q4G0G5 96 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 FAM182AQ5T1J6 154 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 ZNF613Q6PF04 617 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 ZNF283Q8N7M2 679 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 YIPF7Q8N8F6 280 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 Q8NBF4 154 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 TSTD1Q8NFU3 115 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 DCUN1D4Q92564 292 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 IP6K3Q96PC2 410 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 PGLYRP2Q96PD5 576 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 ZNF382Q96SR6 550 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 NMNAT3Q96T66 252 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 HSD17B10Q99714 261 aaKnown RBP4.64□□□□□ -1.67
VPS29-210ENST00000552130 COMMD5Q9GZQ3 224 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 GTSF1LQ9H1H1 148 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 POPDC3Q9HBV1 291 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 DHCR7Q9UBM7 475 aaKnown RBP4.64□□□□□ -1.67
VPS29-210ENST00000552130 PRSS21Q9Y6M0 314 aa4.64□□□□□ -1.67
VPS29-210ENST00000552130 IGHV3OR16-10A0A075B7F0 116 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 A0A0X1KG70 313 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 NKX2-6A6NCS4 301 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 C4orf51C9J302 202 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 RGS5O15539 181 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 IFNA4P05014 189 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 METTL15P1P0C7V9 234 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 NPY1RP25929 384 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 GABRA3P34903 492 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 RBP2P50120 134 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 LY6DQ14210 128 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 SLC30A7Q8NEW0 376 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 OR1J4Q8NGS1 313 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 ACOT12Q8WYK0 555 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 TMEM190Q8WZ59 177 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 F2RL3Q96RI0 385 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 TIMM17AQ99595 171 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 THTPAQ9BU02 230 aa4.63□□□□□ -1.67
VPS29-210ENST00000552130 ZNF696Q9H7X3 374 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms